RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 OSER1Q9NX31 292 aa17.22■□□□□ 0.35
AP1S3-202ENST00000396653 OBP2AQ9NY56 170 aa17.22■□□□□ 0.35
AP1S3-202ENST00000396653 COL6A3P12111 3177 aa17.22■□□□□ 0.35
AP1S3-202ENST00000396653 C2orf78A6NCI8 922 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 HSF2BPO75031 334 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 RTN2O75298 545 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 ABL1P00519 1130 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 TCF3P15923 654 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 AVPR1AP37288 418 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 EIF4A3P38919 411 aaKnown RBP17.21■□□□□ 0.35
AP1S3-202ENST00000396653 PGFP49763 221 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 GSDMDP57764 484 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 SLC7A9P82251 487 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 SLC6A3Q01959 620 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 ASTE1Q2TB18 679 aaPredicted RBP17.21■□□□□ 0.35
AP1S3-202ENST00000396653 BSPRYQ5W0U4 402 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 OR6B2Q6IFH4 312 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 MSANTD2Q6P1R3 559 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 MMS22LQ6ZRQ5 1243 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 SPC24Q8NBT2 197 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 NDRG1Q92597 394 aaKnown RBP17.21■□□□□ 0.35
AP1S3-202ENST00000396653 SMARCD2Q92925 531 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 NXPE3Q969Y0 559 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 E2F7Q96AV8 911 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 ZSWIM3Q96MP5 696 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.21■□□□□ 0.35
AP1S3-202ENST00000396653 ISCUQ9H1K1 167 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 ADAM22Q9P0K1 906 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 ADAMTS1Q9UHI8 967 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 NENFQ9UMX5 172 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
AP1S3-202ENST00000396653 A0A087X0T9 212 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 ANHXE9PGG2 379 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 COCHO43405 550 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 CKMP06732 381 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 FAM228BP0C875 321 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 HDCP19113 662 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 ATP5C1P36542 298 aaKnown RBP17.2■□□□□ 0.34
AP1S3-202ENST00000396653 SLC18A3Q16572 532 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 FAM78AQ5JUQ0 283 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 HFE2Q6ZVN8 426 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 ARCQ7LC44 396 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 MCOLN2Q8IZK6 566 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 ARL14EPQ8N8R7 260 aaPredicted RBP17.2■□□□□ 0.34
AP1S3-202ENST00000396653 FAM149B1Q96BN6 582 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 TRIM11Q96F44 468 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 CHP1Q99653 195 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 DEF6Q9H4E7 631 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 CCSER2Q9H7U1 834 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 NHEJ1Q9H9Q4 299 aaPredicted RBP17.2■□□□□ 0.34
AP1S3-202ENST00000396653 POPDC2Q9HBU9 364 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 TAS2R14Q9NYV8 317 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 ARHGAP26Q9UNA1 814 aa17.2■□□□□ 0.34
AP1S3-202ENST00000396653 XIRP2A4UGR9 3374 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 ECI2O75521 394 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 DAB1O75553 588 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 SP100P23497 879 aaPredicted RBP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 FCARP24071 287 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 YWHAZP63104 245 aaKnown RBP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 HTR4Q13639 388 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 FAM102AQ5T9C2 384 aaPredicted RBP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 DDX42Q86XP3 938 aaKnown RBP eCLIP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 ARID3BQ8IVW6 561 aaPredicted RBP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 CELF5Q8N6W0 485 aaKnown RBP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 KIAA1958Q8N8K9 716 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 C3orf20Q8ND61 904 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 ANP32BQ92688 251 aaKnown RBP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 ELSPBP1Q96BH3 223 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 PIWIL1Q96J94 861 aaKnown RBP17.19■□□□□ 0.34
AP1S3-202ENST00000396653 CCDC42Q96M95 316 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 SLC2A13Q96QE2 648 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 SLC22A12Q96S37 553 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 RNF38Q9H0F5 515 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 ZFP14Q9HCL3 533 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 IGSF9Q9P2J2 1179 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 DNMT3LQ9UJW3 386 aa17.19■□□□□ 0.34
AP1S3-202ENST00000396653 AKR1B10O60218 316 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 PRAMEF12O95522 483 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 FTLP02792 175 aaPredicted RBP17.18■□□□□ 0.34
AP1S3-202ENST00000396653 MYBL1P10243 752 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 MBL2P11226 248 aaPredicted RBP17.18■□□□□ 0.34
AP1S3-202ENST00000396653 USP4Q13107 963 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 ALKBH5Q6P6C2 394 aaKnown RBP17.18■□□□□ 0.34
AP1S3-202ENST00000396653 RSRC2Q7L4I2 434 aaKnown RBP17.18■□□□□ 0.34
AP1S3-202ENST00000396653 TMTC1Q8IUR5 882 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 CCDC170Q8IYT3 715 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 USP13Q92995 863 aaPredicted RBP17.18■□□□□ 0.34
AP1S3-202ENST00000396653 NACA2Q9H009 215 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 TDP1Q9NUW8 608 aa17.18■□□□□ 0.34
AP1S3-202ENST00000396653 MYO10Q9HD67 2058 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 TCRBV5S1A1TA0A578 114 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 TMCO5BA8MYB1 307 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 CAPN9O14815 690 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 SLC34A2O95436 690 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 FYNP06241 537 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 NCAM1P13591 858 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 NNTQ13423 1086 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms