RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 PRKAG3Q9UGI9 489 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 SLC12A4Q9UP95 1085 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 TEX264Q9Y6I9 313 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 HCRTO43612 131 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 SPAG6O75602 509 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 ZFXP17010 805 aaPredicted RBP17.47■□□□□ 0.39
NUP50-202ENST00000396096 LMO2P25791 158 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 ADORA2BP29275 332 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 LRPAP1P30533 357 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 L1CAMP32004 1257 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 FOXN2P32314 431 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 SOX4Q06945 474 aaPredicted RBP17.47■□□□□ 0.39
NUP50-202ENST00000396096 XRCC4Q13426 336 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 SPARCL1Q14515 664 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 MTFR1Q15390 333 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 SPATA21Q7Z572 469 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 TOP6BLQ8N6T0 577 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 C7orf31Q8N865 590 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 SMG8Q8ND04 991 aaKnown RBP17.47■□□□□ 0.39
NUP50-202ENST00000396096 MZB1Q8WU39 189 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 LENG1Q96BZ8 264 aaPredicted RBP17.47■□□□□ 0.39
NUP50-202ENST00000396096 PAFAH2Q99487 392 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 NRDE2Q9H7Z3 1164 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 KLK14Q9P0G3 267 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 IPPQ9Y573 584 aa17.47■□□□□ 0.39
NUP50-202ENST00000396096 C17orf102A2RUQ5 167 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 SPAG7O75391 227 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 MYL3P08590 195 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 PDGFRBP09619 1106 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 NRLP54845 237 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 FBXW10Q5XX13 1052 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 STRADAQ7RTN6 431 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 CDKL3Q8IVW4 592 aaPredicted RBP17.46■□□□□ 0.39
NUP50-202ENST00000396096 CLEC4CQ8WTT0 213 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 DCAKDQ8WVC6 231 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 TNIP3Q96KP6 325 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 AP5M1Q9H0R1 490 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 PNPLA8Q9NP80 782 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 ARL2BPQ9Y2Y0 163 aa17.46■□□□□ 0.39
NUP50-202ENST00000396096 XPO1O14980 1071 aaKnown RBP17.46■□□□□ 0.38
NUP50-202ENST00000396096 KCNN4O15554 427 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 RASSF9O75901 435 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 ZBED1O96006 694 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 GNAT1P11488 350 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 TFE3P19532 575 aaPredicted RBP17.46■□□□□ 0.38
NUP50-202ENST00000396096 CYP2F1P24903 491 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 RBL1P28749 1068 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 ELK3P41970 407 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 NR2C2P49116 596 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 ZNF200P98182 395 aaPredicted RBP17.46■□□□□ 0.38
NUP50-202ENST00000396096 ADCY1Q08828 1119 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 EFTUD2Q15029 972 aaKnown RBP eCLIP17.46■□□□□ 0.382e-11■■■■■ 41.9
NUP50-202ENST00000396096 EFHC1Q5JVL4 640 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 CGB2Q6NT52 195 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 ADGRF2Q8IZF7 708 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 TAB3Q8N5C8 712 aaPredicted RBP17.46■□□□□ 0.38
NUP50-202ENST00000396096 CYTH2Q99418 400 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 ADAM33Q9BZ11 813 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 KIF9Q9HAQ2 790 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.38
NUP50-202ENST00000396096 A0A1W2PPM1 405 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 HUS1O60921 280 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 MSH2P43246 934 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 LILRA4P59901 499 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 PDK4Q16654 411 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 ZNF618Q5T7W0 954 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 IGDCC3Q8IVU1 814 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 SLC2A14Q8TDB8 520 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 ALKBH8Q96BT7 664 aaKnown RBP17.45■□□□□ 0.38
NUP50-202ENST00000396096 HNRNPABQ99729 332 aaKnown RBP17.45■□□□□ 0.38
NUP50-202ENST00000396096 PRDM16Q9HAZ2 1276 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 RAB6BQ9NRW1 208 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 RNF19AQ9NV58 838 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.45■□□□□ 0.38
NUP50-202ENST00000396096 CHMP2BQ9UQN3 213 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 HEY1Q9Y5J3 304 aa17.45■□□□□ 0.38
NUP50-202ENST00000396096 IGF2BP3O00425 579 aaKnown RBP eCLIP17.44■□□□□ 0.38
NUP50-202ENST00000396096 ZWINTO95229 277 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 LCP1P13796 627 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 RPA3P35244 121 aaPredicted RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 CCL14Q16627 93 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 OSTM1Q86WC4 334 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 PSTKQ8IV42 348 aaKnown RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 C4orf33Q8N1A6 199 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 ARRDC4Q8NCT1 418 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 MCUQ8NE86 351 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 KLC2Q9H0B6 622 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 HAUS2Q9NVX0 235 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.44■□□□□ 0.38
NUP50-202ENST00000396096 AP4E1Q9UPM8 1137 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 TRPM7Q96QT4 1865 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 GCATO75600 419 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 CA4P22748 312 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 TKTP29401 623 aaKnown RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 RGS2P41220 211 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 MATKP42679 507 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 PURAQ00577 322 aaKnown RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 BEX3Q00994 111 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 GALNTL6Q49A17 601 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms