RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SYT15Q9BQS2 421 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 C2orf49Q9BVC5 232 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 TSSK1BQ9BXA7 367 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 EMILIN2Q9BXX0 1053 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RRAGCQ9HB90 399 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 EML4Q9HC35 981 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 TRPC7Q9HCX4 862 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PLAAQ9Y263 795 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 TET1Q8NFU7 2136 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PITPNM1O00562 1244 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 GPC4O75487 556 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CRCPO75575 148 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CIB2O75838 187 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ADSSP30520 456 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 BEND5Q7L4P6 421 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 KIAA0319LQ8IZA0 1049 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SLC7A14Q8TBB6 771 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DUSP16Q9BY84 665 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SAYSD1Q9NPB0 183 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 KCTD5Q9NXV2 234 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SAGE1Q9NXZ1 904 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ARIH1Q9Y4X5 557 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DUSP10Q9Y6W6 482 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SLCO1B7G3V0H7 640 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 C4BPAP04003 597 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 GRK4P32298 578 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CDH5P33151 784 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGAP1Q07960 439 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF792Q3KQV3 632 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 LBHD1Q9BQE6 289 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 UBE2OQ9C0C9 1292 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 LRRC40Q9H9A6 602 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PCSK1NQ9UHG2 260 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DMGDHQ9UI17 866 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FAN1Q9Y2M0 1017 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 NR2E3Q9Y5X4 410 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 EEF2KO00418 725 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RAD51CO43502 376 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 NOL4O94818 638 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FGF19O95750 216 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PTPN9P43378 593 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RGS4P49798 205 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FMO1Q01740 532 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 BSPRYQ5W0U4 402 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MRPS31Q92665 395 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 WWP1Q9H0M0 922 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 AP4E1Q9UPM8 1137 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PCDHAC2Q9Y5I4 1007 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 C2orf81A6NN90 581 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 HGSO14964 777 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 LTFP02788 710 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 GSTA1P08263 222 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MAPK9P45984 424 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PDIA2Q13087 525 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ITGA7Q13683 1181 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FAM83EQ2M2I3 478 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ACOT1Q86TX2 421 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 HSPH1Q92598 858 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ASB2Q96Q27 587 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 POLD4Q9HCU8 107 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 TRPM5Q9NZQ8 1165 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 XPO7Q9UIA9 1087 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CACNA1GO43497 2377 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 O00370 1275 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PFKMP08237 780 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PTPN7P35236 360 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MAGOHP61326 146 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PTCD2Q8WV60 388 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RSRC1Q96IZ7 334 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CLMNQ96JQ2 1002 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FOPNLQ96NB1 174 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SRRDQ9UH36 339 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MAFFQ9ULX9 164 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SSC5DA1L4H1 1573 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF646O15015 1829 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CHADO15335 359 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PPFIA2O75334 1257 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 LMNAP02545 664 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PDGFRBP09619 1106 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SMIM10L2AP0DMW4 78 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SMIM10L2BP0DMW5 78 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ATP5C1P36542 298 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 HK2P52789 917 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 AP1B1Q10567 949 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MTFR1Q15390 333 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SLC26A11Q86WA9 606 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SUGP1Q8IWZ8 645 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CRYBG2Q8N1P7 616 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 IFT43Q96FT9 208 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 YME1L1Q96TA2 773 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PI4K2AQ9BTU6 479 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CNTN6Q9UQ52 1028 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 IGKV6-21A0A0C4DH24 114 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 LACTBL1A8MY62 500 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 M0QYT0 321 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZBTB39O15060 712 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CREB3O43889 395 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 YBEYP58557 167 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 TTLL9Q3SXZ7 439 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 BBS9Q3SYG4 887 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms