RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 SCOCQ9UIL1 159 aa10.7□□□□□ -0.7
HIF1A-203ENST00000394997 ANAPC5Q9UJX4 755 aa10.7□□□□□ -0.7
HIF1A-203ENST00000394997 TSPAN16Q9UKR8 245 aa10.7□□□□□ -0.7
HIF1A-203ENST00000394997 USP18Q9UMW8 372 aa10.7□□□□□ -0.7
HIF1A-203ENST00000394997 PTPRSQ13332 1948 aa10.7□□□□□ -0.7
HIF1A-203ENST00000394997 SPTBN5Q9NRC6 3674 aaKnown RBP10.7□□□□□ -0.7
HIF1A-203ENST00000394997 SCN8AQ9UQD0 1980 aa10.7□□□□□ -0.7
HIF1A-203ENST00000394997 GABRDO14764 452 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PFDN1O60925 122 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 SNUPNO95149 360 aaKnown RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 HARSP12081 509 aaKnown RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 KCNE1P15382 129 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 L1CAMP32004 1257 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 SLC8A3P57103 927 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 BNIP1Q12981 228 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 C6orf163Q5TEZ5 329 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 LIN9Q5TKA1 542 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 DNAJC24Q6P3W2 148 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 OSTM1Q86WC4 334 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 CCDC89Q8N998 374 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 TEKT4Q8WW24 435 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 ZNF419Q96HQ0 510 aaPredicted RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 POPDC2Q9HBU9 364 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 CFAP73A6NFT4 308 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 MDM4O15151 490 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 OPHN1O60890 802 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 BEST1O76090 585 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 KRT1P04264 644 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 KRT3P12035 628 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 LMO2P25791 158 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PLCB3Q01970 1234 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 C9orf57Q5W0N0 161 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 TMEM154Q6P9G4 183 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 ERICH1Q86X53 443 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 TAB3Q8N5C8 712 aaPredicted RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 BANPQ8N9N5 519 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 DTX3LQ8TDB6 740 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 STK32AQ8WU08 396 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PTPRN2Q92932 1015 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 LENG1Q96BZ8 264 aaPredicted RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PLEKHA5Q9HAU0 1116 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 DPP3Q9NY33 737 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 TCEAL9Q9UHQ7 104 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 ANKRD36A6QL64 1941 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 POC1B-GALNT4F8VUJ3 575 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 H3BRB1 525 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 ATF2P15336 505 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 SLC18A2Q05940 514 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 MGAT3Q09327 533 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 SNAPC2Q13487 334 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 DPYSL2Q16555 572 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 CFAP157Q5JU67 520 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 HHATQ5VTY9 493 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PRPF39Q86UA1 669 aaKnown RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 ECHDC2Q86YB7 292 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 ZBTB8OSQ8IWT0 167 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PPP1R13LQ8WUF5 828 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 HPDLQ96IR7 371 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 CFAP57Q96MR6 1250 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PPP1R10Q96QC0 940 aaKnown RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 CYTH2Q99418 400 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 B3GNT5Q9BYG0 378 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 TUT1Q9H6E5 874 aaKnown RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PCDH18Q9HCL0 1135 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 ARHGEF4Q9NR80 690 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 PAPOLBQ9NRJ5 636 aaKnown RBP10.69□□□□□ -0.7
HIF1A-203ENST00000394997 STRIP2Q9ULQ0 834 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 MIA3Q5JRA6 1907 aa10.69□□□□□ -0.7
HIF1A-203ENST00000394997 TJP3O95049 919 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 NQO1P15559 274 aaKnown RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 SCNN1AP37088 669 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 NCALDP61601 193 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 BZW1Q7L1Q6 419 aaKnown RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 GPRC5AQ8NFJ5 357 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 P3H4Q92791 437 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 ABTB1Q969K4 478 aaPredicted RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 RTP3Q9BQQ7 232 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 PITPNM3Q9BZ71 974 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 ACSS3Q9H6R3 686 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 IL1BP01584 269 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 VAV1P15498 845 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 ATP5DP30049 168 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 AFF1P51825 1210 aaKnown RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 MTFR1Q15390 333 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 RIBC1Q8N443 379 aaPredicted RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 C10orf82Q8WW14 230 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 ANKRD36BP1Q96IX9 119 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 MAGEB18Q96M61 343 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 RNF157Q96PX1 679 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 NXF3Q9H4D5 531 aaKnown RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 RPF1Q9H9Y2 349 aaKnown RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 BCLAF3A2AJT9 711 aaKnown RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 PIAS1O75925 651 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 RPA3P35244 121 aaPredicted RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 RASSF2P50749 326 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 PITX1P78337 314 aaPredicted RBP10.68□□□□□ -0.7
HIF1A-203ENST00000394997 STAT4Q14765 748 aa10.68□□□□□ -0.7
HIF1A-203ENST00000394997 CEP128Q6ZU80 1094 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms