RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ZNF699Q32M78 642 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 ZNF667Q5HYK9 610 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 GRAMD4Q6IC98 578 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 MINDY1Q8N5J2 469 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 OR2I1PQ8NGU4 316 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 TNIP3Q96KP6 325 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 ACOX2Q99424 681 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 DUSP9Q99956 384 aaKnown RBP22.36■■□□□ 1.17
TRAF4-203ENST00000394925 C7orf25Q9BPX7 421 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 ZSCAN16Q9H4T2 348 aaPredicted RBP22.36■■□□□ 1.17
TRAF4-203ENST00000394925 KRT82Q9NSB4 513 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 STARD13Q9Y3M8 1113 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 FAM92AA1XBS5 289 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 NEDD8-MDP1E9PL57 170 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 SPTLC2O15270 562 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 TLR5O60602 858 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 FAM193AP78312 1265 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 COL9A2Q14055 689 aaPredicted RBP22.35■■□□□ 1.17
TRAF4-203ENST00000394925 SDE2Q6IQ49 451 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 CNNM4Q6P4Q7 775 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 RABEPKQ7Z6M1 372 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 ACOT1Q86TX2 421 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 SLC41A1Q8IVJ1 513 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 CHPFQ8IZ52 775 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 FUKQ8N0W3 1084 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 IQUBQ8NA54 791 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 PLEKHO2Q8TD55 490 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 SDCBP2Q9H190 292 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 VRTNQ9H8Y1 702 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 FOXD4L1Q9NU39 408 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 COMMD8Q9NX08 183 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 CYP8B1Q9UNU6 501 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 PCDH15Q96QU1 1955 aa22.35■■□□□ 1.17
TRAF4-203ENST00000394925 ANKRD11Q6UB99 2663 aaPredicted RBP22.34■■□□□ 1.17
TRAF4-203ENST00000394925 ARHGAP33O14559 1287 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 EXOC3O60645 756 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 ZNF217O75362 1048 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 BEST1O76090 585 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 TBX18O95935 607 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 NDUFV2P19404 249 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 CASP1P29466 404 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 TPGS1Q6ZTW0 290 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 UNC13DQ70J99 1090 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 HTR3DQ70Z44 454 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 TRIML1Q8N9V2 468 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 ZMIZ2Q8NF64 920 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 IPO4Q8TEX9 1081 aaKnown RBP22.34■■□□□ 1.17
TRAF4-203ENST00000394925 HSPA12BQ96MM6 686 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 XPO6Q96QU8 1125 aaKnown RBP22.34■■□□□ 1.17
TRAF4-203ENST00000394925 SMOQ99835 787 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 BBS2Q9BXC9 721 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 BLZF1Q9H2G9 400 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 SLC39A2Q9NP94 309 aa22.34■■□□□ 1.17
TRAF4-203ENST00000394925 TFIP11Q9UBB9 837 aaKnown RBP22.34■■□□□ 1.17
TRAF4-203ENST00000394925 CCDC130P13994 396 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 TYRP14679 529 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 RDXP35241 583 aaKnown RBP22.33■■□□□ 1.17
TRAF4-203ENST00000394925 EHHADHQ08426 723 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 ORC1Q13415 861 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 NCOA4Q13772 614 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 C12orf56Q8IXR9 622 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 CHCHD4Q8N4Q1 142 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 KLF16Q9BXK1 252 aaPredicted RBP22.33■■□□□ 1.17
TRAF4-203ENST00000394925 TLR8Q9NR97 1041 aaKnown RBP22.33■■□□□ 1.17
TRAF4-203ENST00000394925 CGNQ9P2M7 1197 aaKnown RBP22.33■■□□□ 1.17
TRAF4-203ENST00000394925 RAD54BQ9Y620 910 aa22.33■■□□□ 1.17
TRAF4-203ENST00000394925 NBEAQ8NFP9 2946 aa22.33■■□□□ 1.16
TRAF4-203ENST00000394925 LRRIQ3A6PVS8 624 aaPredicted RBP22.32■■□□□ 1.16
TRAF4-203ENST00000394925 PRRT4C9JH25 899 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 H0Y626 953 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 CACNG3O60359 315 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 GREM1O60565 184 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 PPP6R2O75170 966 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 TRIM16O95361 564 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 CD59P13987 128 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 MAP3K7CLP57077 242 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 SHC4Q6S5L8 630 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 TOGARAM2Q6ZUX3 1019 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 RGL4Q8IZJ4 473 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 SLC2A14Q8TDB8 520 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 SLC6A17Q9H1V8 727 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 FBXO44Q9H4M3 255 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 CD248Q9HCU0 757 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 CD93Q9NPY3 652 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 WDR35Q9P2L0 1181 aa22.32■■□□□ 1.16
TRAF4-203ENST00000394925 FREM2Q5SZK8 3169 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.31■■□□□ 1.16
TRAF4-203ENST00000394925 A0A1W2PQD8 194 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 STX6O43752 255 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 VNN1O95497 513 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 C4BPAP04003 597 aaKnown RBP22.31■■□□□ 1.16
TRAF4-203ENST00000394925 SYPP08247 313 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 ATP5C1P36542 298 aaKnown RBP22.31■■□□□ 1.16
TRAF4-203ENST00000394925 RING1Q06587 406 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 KNOP1Q1ED39 458 aaKnown RBP22.31■■□□□ 1.16
TRAF4-203ENST00000394925 BMT2Q1RMZ1 405 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 PARD3BQ8TEW8 1205 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 GABRG3Q99928 467 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 FAM49BQ9NUQ9 324 aa22.31■■□□□ 1.16
TRAF4-203ENST00000394925 CACNA2D2Q9NY47 1150 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms