RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 APC2O95996 2303 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 A8MXQ7 604 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 STX6O43752 255 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 CACNG3O60359 315 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 STAU1O95793 577 aaKnown RBP20.88■□□□□ 0.93
UPK3B-203ENST00000394849 ZNF132P52740 706 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 CACNA2D1P54289 1103 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 GOLGA8FQ08AF8 430 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 GOLGA8DPQ0D2H9 430 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 COL28A1Q2UY09 1125 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 EGFLAMQ63HQ2 1017 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 HTR3DQ70Z44 454 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 CBWD2Q8IUF1 395 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 CCDC65Q8IXS2 484 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 B3GNT5Q9BYG0 378 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.88■□□□□ 0.93
UPK3B-203ENST00000394849 TMEM30AQ9NV96 361 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 HCN2Q9UL51 889 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 SRPRBQ9Y5M8 271 aaKnown RBP20.88■□□□□ 0.93
UPK3B-203ENST00000394849 PLXNB3Q9ULL4 1909 aa20.88■□□□□ 0.93
UPK3B-203ENST00000394849 A0A1B0GTW7 788 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 FAM92AA1XBS5 289 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 ZDHHC11BP0C7U3 371 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 TNNI1P19237 187 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 ATICP31939 592 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 WASP42768 502 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 GRIK2Q13002 908 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 E2F5Q15329 346 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 IL27RAQ6UWB1 636 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 MIB1Q86YT6 1006 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 SPRYD3Q8NCJ5 442 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 CADM4Q8NFZ8 388 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 DNASE2BQ8WZ79 361 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 MRGPRX1Q96LB2 322 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 BBS2Q9BXC9 721 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 CCSER2Q9H7U1 834 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 DMAP1Q9NPF5 467 aaPredicted RBP20.87■□□□□ 0.93
UPK3B-203ENST00000394849 HSPBP1Q9NZL4 362 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 MARK1Q9P0L2 795 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 MTMR6Q9Y217 621 aa20.87■□□□□ 0.93
UPK3B-203ENST00000394849 NPC1O15118 1278 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 CBFA2T3O75081 653 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 CST3P01034 146 aaPredicted RBP20.86■□□□□ 0.93
UPK3B-203ENST00000394849 CD6P30203 668 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 SYAP1Q96A49 352 aaPredicted RBP20.86■□□□□ 0.93
UPK3B-203ENST00000394849 SMARCD1Q96GM5 515 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 TNIP3Q96KP6 325 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 DPEP3Q9H4B8 488 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 FBXO44Q9H4M3 255 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 LSM7Q9UK45 103 aaKnown RBP20.86■□□□□ 0.93
UPK3B-203ENST00000394849 PCOLCE2Q9UKZ9 415 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 NME7Q9Y5B8 376 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 PTPRBP23467 1997 aa20.86■□□□□ 0.93
UPK3B-203ENST00000394849 EIF4E1BA6NMX2 242 aaKnown RBP20.85■□□□□ 0.93
UPK3B-203ENST00000394849 NEDD8-MDP1E9PL57 170 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 CLDN5O00501 218 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 CER1O95813 267 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 DLATP10515 647 aaKnown RBP20.85■□□□□ 0.93
UPK3B-203ENST00000394849 TYRP14679 529 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 STAT6P42226 847 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 SLC5A3P53794 718 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 TRPC3Q13507 836 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 STARD3Q14849 445 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 SNRNP35Q16560 246 aaKnown RBP20.85■□□□□ 0.93
UPK3B-203ENST00000394849 PNPLA1Q8N8W4 532 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 SCAMP5Q8TAC9 235 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 KCNK16Q96T55 309 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 ACOX2Q99424 681 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 CGRRF1Q99675 332 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 CDC6Q99741 560 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 FGFBP2Q9BYJ0 223 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 LRRC27Q9C0I9 530 aa20.85■□□□□ 0.93
UPK3B-203ENST00000394849 FBXO2Q9UK22 296 aaPredicted RBP20.85■□□□□ 0.93
UPK3B-203ENST00000394849 URB1O60287 2271 aaKnown RBP20.84■□□□□ 0.93
UPK3B-203ENST00000394849 MEI4A8MW99 385 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 TLR5O60602 858 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 OXTRP30559 389 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 DGKGP49619 791 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 SNRPFP62306 86 aaKnown RBP20.84■□□□□ 0.93
UPK3B-203ENST00000394849 PSMD6Q15008 389 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 TMPRSS7Q7RTY8 843 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 SETD7Q8WTS6 366 aaKnown RBP20.84■□□□□ 0.93
UPK3B-203ENST00000394849 MED10Q9BTT4 135 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 ZSCAN16Q9H4T2 348 aaPredicted RBP20.84■□□□□ 0.93
UPK3B-203ENST00000394849 TLR8Q9NR97 1041 aaKnown RBP20.84■□□□□ 0.93
UPK3B-203ENST00000394849 PCDHGB2Q9Y5G2 931 aa20.84■□□□□ 0.93
UPK3B-203ENST00000394849 TRIM24O15164 1050 aa20.83■□□□□ 0.93
UPK3B-203ENST00000394849 EIF3DO15371 548 aaKnown RBP eCLIP20.83■□□□□ 0.93
UPK3B-203ENST00000394849 IRF1P10914 325 aa20.83■□□□□ 0.93
UPK3B-203ENST00000394849 PDIA4P13667 645 aaKnown RBP20.83■□□□□ 0.93
UPK3B-203ENST00000394849 KIAA1324Q6UXG2 1013 aaKnown RBP20.83■□□□□ 0.93
UPK3B-203ENST00000394849 SLCO6A1Q86UG4 719 aa20.83■□□□□ 0.93
UPK3B-203ENST00000394849 FAM35AQ86V20 835 aa20.83■□□□□ 0.93
UPK3B-203ENST00000394849 GALNT15Q8N3T1 639 aa20.83■□□□□ 0.93
UPK3B-203ENST00000394849 VRTNQ9H8Y1 702 aa20.83■□□□□ 0.93
UPK3B-203ENST00000394849 WSB2Q9NYS7 404 aaPredicted RBP20.83■□□□□ 0.93
UPK3B-203ENST00000394849 GMIPQ9P107 970 aa20.83■□□□□ 0.93
UPK3B-203ENST00000394849 NXF1Q9UBU9 619 aaKnown RBP20.83■□□□□ 0.93
UPK3B-203ENST00000394849 PRRT4C9JH25 899 aa20.82■□□□□ 0.92
UPK3B-203ENST00000394849 ATP5C1P36542 298 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms