RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 NOP14P78316 857 aaKnown RBP12.34□□□□□ -0.43
PPP3CB-203ENST00000394828 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
PPP3CB-203ENST00000394828 ENOSF1Q7L5Y1 443 aa12.34□□□□□ -0.43
PPP3CB-203ENST00000394828 RFWD2Q8NHY2 731 aa12.34□□□□□ -0.43
PPP3CB-203ENST00000394828 SLC35G2Q8TBE7 412 aa12.34□□□□□ -0.43
PPP3CB-203ENST00000394828 NKIRAS1Q9NYS0 192 aa12.34□□□□□ -0.43
PPP3CB-203ENST00000394828 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
PPP3CB-203ENST00000394828 CES2O00748 559 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 GSC2O15499 205 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 DUSP11O75319 330 aaKnown RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 TOMM70O94826 608 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 NOGQ13253 232 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CUL2Q13617 745 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 LRRC8BQ6P9F7 803 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 NLRP9Q7RTR0 991 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 C10orf82Q8WW14 230 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 C9orf72Q96LT7 481 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 THAP2Q9H0W7 228 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 A0A0A6YYK5 440 aaPredicted RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 A0A0G2JND7 137 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 NDUFB5O43674 189 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 NFICP08651 508 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 TMEM253P0C7T8 217 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CYP2C9P11712 490 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CDK4P11802 303 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 HOXA11P31270 313 aaPredicted RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 MLH1P40692 756 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 PSMD7P51665 324 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 AP3M2P53677 418 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 MYL6P60660 151 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CCDC137Q6PK04 289 aaKnown RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 TREML1Q86YW5 311 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CCDC105Q8IYK2 499 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 UBR7Q8N806 425 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 MCUR1Q96AQ8 359 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CAPNS2Q96L46 248 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 FAM118BQ9BPY3 351 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 PPM1HQ9ULR3 514 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 NAALADL1Q9UQQ1 740 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 LACTBL1A8MY62 500 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 GYG2O15488 501 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 TFPTP0C1Z6 253 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CCDC166P0CW27 439 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 KRT5P13647 590 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CDC16Q13042 620 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 DUOXA2Q1HG44 320 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CTC1Q2NKJ3 1217 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 RBM44Q6ZP01 1051 aaKnown RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CLNKQ7Z7G1 428 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 ZNF554Q86TJ5 538 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 VPS52Q8N1B4 723 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CXorf38Q8TB03 319 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 TMEM40Q8WWA1 233 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 DNAJB3Q8WWF6 145 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 FAM161BQ96MY7 647 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 OSMRQ99650 979 aa12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 RPF1Q9H9Y2 349 aaKnown RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 MTRF1LQ9UGC7 380 aaKnown RBP12.33□□□□□ -0.44
PPP3CB-203ENST00000394828 CEP350Q5VT06 3117 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 TXNDC9O14530 226 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 LSM1O15116 133 aaKnown RBP12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 GJA9P57773 515 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 SURF1Q15526 300 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 SLC44A4Q53GD3 710 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 LPCAT4Q643R3 524 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 MFSD5Q6N075 450 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 STMN4Q9H169 189 aaPredicted RBP12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 XYLT2Q9H1B5 865 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 CXCL16Q9H2A7 254 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 KANSL3Q9P2N6 904 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 SIX4Q9UIU6 781 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 COG5Q9UP83 839 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 SH3GLB1Q9Y371 365 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 PCDHA3Q9Y5H8 950 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 GMEB1Q9Y692 573 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 RASA4BC9J798 803 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 TP73O15350 636 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 RASA4O43374 803 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 C6orf222P0C671 652 aaPredicted RBP12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 RARGP13631 454 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 HOXD12P35452 270 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 CACNB2Q08289 660 aaPredicted RBP12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 SLC10A6Q3KNW5 377 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 JADE1Q6IE81 842 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 SLFN11Q7Z7L1 901 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 FAM81BQ96LP2 452 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 ECSITQ9BQ95 431 aa12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 UPF3AQ9H1J1 476 aaKnown RBP12.32□□□□□ -0.44
PPP3CB-203ENST00000394828 IL18RAPO95256 599 aa12.31□□□□□ -0.44
PPP3CB-203ENST00000394828 ASMTLO95671 621 aa12.31□□□□□ -0.44
PPP3CB-203ENST00000394828 PGK1P00558 417 aa12.31□□□□□ -0.44
PPP3CB-203ENST00000394828 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
PPP3CB-203ENST00000394828 ATP6V1B1P15313 513 aa12.31□□□□□ -0.44
PPP3CB-203ENST00000394828 RXRGP48443 463 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms