RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 C7orf31Q8N865 590 aa15.96■□□□□ 0.15
UBE2D3-207ENST00000394801 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.15
UBE2D3-207ENST00000394801 ZNF560Q96MR9 790 aa15.96■□□□□ 0.15
UBE2D3-207ENST00000394801 PAFAH2Q99487 392 aa15.96■□□□□ 0.15
UBE2D3-207ENST00000394801 LPIN3Q9BQK8 851 aa15.96■□□□□ 0.15
UBE2D3-207ENST00000394801 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
UBE2D3-207ENST00000394801 PIN4Q9Y237 131 aaKnown RBP15.96■□□□□ 0.15
UBE2D3-207ENST00000394801 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 SPAG6O75602 509 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 LMO2P25791 158 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 RPA3P35244 121 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 ACADSBP45954 432 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 PSEN2P49810 448 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 SLC40A1Q9NP59 571 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 ABCF3Q9NUQ8 709 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 TREHO43280 583 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 HCRTO43612 131 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 L1CAMP32004 1257 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 PDK4Q16654 411 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 GALNTL6Q49A17 601 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 IGDCC3Q8IVU1 814 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 C4orf33Q8N1A6 199 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 TAB3Q8N5C8 712 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 GBP7Q8N8V2 638 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 PPP1R13LQ8WUF5 828 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 DCAKDQ8WVC6 231 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 CYTH2Q99418 400 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 DNAI2Q9GZS0 605 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 NRDE2Q9H7Z3 1164 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.95■□□□□ 0.146e-9■□□□□ 11.3
UBE2D3-207ENST00000394801 FLRT1Q9NZU1 646 aa15.95■□□□□ 0.14
UBE2D3-207ENST00000394801 KCNN4O15554 427 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 TOMM70O94826 608 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 PDGFRBP09619 1106 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 CCDC130P13994 396 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 TFE3P19532 575 aaPredicted RBP15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 RBL1P28749 1068 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 ELK3P41970 407 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 TAF6P49848 677 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 CRYBB1P53674 252 aaPredicted RBP15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 SF3A3Q12874 501 aaKnown RBP eCLIP15.94■□□□□ 0.142e-8■□□□□ 10.5
UBE2D3-207ENST00000394801 C4orf22Q6V702 233 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 FUKQ8N0W3 1084 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 NME8Q8N427 588 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 APOL6Q9BWW8 343 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 PITPNM3Q9BZ71 974 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 PNPLA8Q9NP80 782 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 RAB6BQ9NRW1 208 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 RNF19AQ9NV58 838 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 Q9Y3F1 56 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 STARD13Q9Y3M8 1113 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 HEY1Q9Y5J3 304 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 ZWINTO95229 277 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 ZFXP17010 805 aaPredicted RBP15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 KRT4P19013 534 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 CA4P22748 312 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 MSH2P43246 934 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 CPT1AP50416 773 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 EFTUD2Q15029 972 aaKnown RBP eCLIP15.94■□□□□ 0.144e-8■■■■■ 30.7
UBE2D3-207ENST00000394801 SV2CQ496J9 727 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 RNF43Q68DV7 783 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 APPL2Q8NEU8 664 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 CLEC4CQ8WTT0 213 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 ALKBH8Q96BT7 664 aaKnown RBP15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 ADAM33Q9BZ11 813 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 SNX25Q9H3E2 840 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 HAUS2Q9NVX0 235 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 MTMR10Q9NXD2 777 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 KLK14Q9P0G3 267 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 GRID1Q9ULK0 1009 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 DOCK3Q8IZD9 2030 aa15.94■□□□□ 0.14
UBE2D3-207ENST00000394801 ATP2C2O75185 946 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 ZBED1O96006 694 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 FAM163BP0C2L3 166 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 CYP2F1P24903 491 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 HOXC8P31273 242 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 NR2C2P49116 596 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 SOX4Q06945 474 aaPredicted RBP15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 SLC1A5Q15758 541 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 ZKSCAN8Q15776 578 aaPredicted RBP15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 ZNF618Q5T7W0 954 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 STRADAQ7RTN6 431 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 MRRFQ96E11 262 aaKnown RBP15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 KLC4Q9NSK0 619 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 CPA4Q9UI42 421 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 CHMP2BQ9UQN3 213 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 PCNTO95613 3336 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 TCRBV9S1A1TA0A576 114 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 ADORA2BP29275 332 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 MAP2K2P36507 400 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 MCUQ8NE86 351 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 SLC2A14Q8TDB8 520 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 TNIP3Q96KP6 325 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 PAIP2Q9BPZ3 127 aaKnown RBP15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 TACO1Q9BSH4 297 aaKnown RBP15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 KLC2Q9H0B6 622 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 IPPQ9Y573 584 aa15.93■□□□□ 0.14
UBE2D3-207ENST00000394801 XPO1O14980 1071 aaKnown RBP15.92■□□□□ 0.14
UBE2D3-207ENST00000394801 GCATO75600 419 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms