RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 ETNK2Q9NVF9 386 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 HESX1Q9UBX0 185 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 TTLL3Q9Y4R7 772 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 ATP5HO75947 161 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 APRTP07741 180 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 T-ENOLP0DO92 83 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 NEK3P51956 506 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 ATXN1P54253 815 aaKnown RBP17.31■□□□□ 0.36
PRDM5-202ENST00000394435 SESTD1Q86VW0 696 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 LRRC6Q86X45 466 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 CTAGE3PQ8IX95 158 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 PPM1NQ8N819 430 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 OR6B3Q8NGW1 331 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 CLEC4CQ8WTT0 213 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 RTP4Q96DX8 246 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 APOPT1Q96IL0 206 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 FAM111AQ96PZ2 611 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 EIF2AQ9BY44 585 aaKnown RBP17.31■□□□□ 0.36
PRDM5-202ENST00000394435 LRMDAQ9H2I8 198 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 KANSL3Q9P2N6 904 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 HES2Q9Y543 173 aa17.31■□□□□ 0.36
PRDM5-202ENST00000394435 BCLAF3A2AJT9 711 aaKnown RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 CBX6O95503 412 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 TAF1BQ53T94 588 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 CAND1Q86VP6 1230 aaKnown RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 L3MBTL3Q96JM7 780 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 RAB3IPQ96QF0 476 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 FAM124BQ9H5Z6 455 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 NUMBLQ9Y6R0 609 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 RBM47A0AV96 593 aaKnown RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 CFAP69A5D8W1 941 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 CXorf49A8MYA2 514 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 C2CD2LO14523 706 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 SPAG6O75602 509 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 SNAI1O95863 264 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 C1QAP02745 245 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 TROVE2P10155 538 aaKnown RBP eCLIP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 CYP2F1P24903 491 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 HOXA11P31270 313 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 SLC18A2Q05940 514 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 SNAPC2Q13487 334 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 SH2D5Q6ZV89 423 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 USP6NLQ92738 828 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 TTC17Q96AE7 1141 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 TBCBQ99426 244 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 KATNBL1Q9H079 304 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 KLC2Q9H0B6 622 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 PNPLA8Q9NP80 782 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 SETD4Q9NVD3 440 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 ZC3H7BQ9UGR2 993 aaKnown RBP17.3■□□□□ 0.36
PRDM5-202ENST00000394435 ZFP69BQ9UJL9 534 aa17.3■□□□□ 0.36
PRDM5-202ENST00000394435 SETSIPP0DME0 302 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 MTDHQ86UE4 582 aaKnown RBP17.29■□□□□ 0.36
PRDM5-202ENST00000394435 EMID1Q96A84 441 aaPredicted RBP17.29■□□□□ 0.36
PRDM5-202ENST00000394435 SNX27Q96L92 541 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 NRDE2Q9H7Z3 1164 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 PLAC1Q9HBJ0 212 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 POPDC2Q9HBU9 364 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 PLXNB2O15031 1838 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 TRIM49D1C9J1S8 452 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 MDM4O15151 490 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 ANP32DO95626 131 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 PDGFRBP09619 1106 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 DHRS4L1P0CG22 281 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 CCDC130P13994 396 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 SMPD1P17405 629 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 ADORA2BP29275 332 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 ETV4P43268 484 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 SLC45A4Q5BKX6 768 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 ZNF410Q86VK4 478 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 SLC26A11Q86WA9 606 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 SLC7A6OSQ96CW6 309 aaPredicted RBP17.29■□□□□ 0.36
PRDM5-202ENST00000394435 ZNF670Q9BS34 389 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 TSSK1BQ9BXA7 367 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 DHX35Q9H5Z1 703 aaKnown RBP17.29■□□□□ 0.36
PRDM5-202ENST00000394435 CDHR5Q9HBB8 845 aa17.29■□□□□ 0.36
PRDM5-202ENST00000394435 A0A0G2JND7 137 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 A8MXQ7 604 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 NEFHP12036 1026 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 LCP1P13796 627 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 BGNP21810 368 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 CCND1P24385 295 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 L1CAMP32004 1257 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 CCNA1P78396 465 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 GBE1Q04446 702 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 SLC10A2Q12908 348 aaPredicted RBP17.28■□□□□ 0.36
PRDM5-202ENST00000394435 SOWAHAQ2M3V2 549 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 TTC39BQ5VTQ0 682 aaPredicted RBP17.28■□□□□ 0.36
PRDM5-202ENST00000394435 CATSPER4Q7RTX7 472 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 TRIM56Q9BRZ2 755 aaKnown RBP17.28■□□□□ 0.36
PRDM5-202ENST00000394435 APOL6Q9BWW8 343 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 EBF2Q9HAK2 575 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 PLEKHA5Q9HAU0 1116 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 SMYD2Q9NRG4 433 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 GJD2Q9UKL4 321 aa17.28■□□□□ 0.36
PRDM5-202ENST00000394435 KAT6AQ92794 2004 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms