RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 KLHDC10Q6PID8 442 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 SLC9A9Q8IVB4 645 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 GPD1LQ8N335 351 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 NME8Q8N427 588 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.08■□□□□ 0.01
SFXN3-202ENST00000393459 WWP1Q9H0M0 922 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 RNF19AQ9NV58 838 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 UBAP1Q9NZ09 502 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 SOX13Q9UN79 622 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 FOCADQ5VW36 1801 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 RGPD3A6NKT7 1758 aaPredicted RBP15.08■□□□□ 0.01
SFXN3-202ENST00000393459 RGPD4Q7Z3J3 1758 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 CROCCQ5TZA2 2017 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 TMX2-CTNND1H3BSU7 103 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 ABLIM1O14639 778 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 STAM2O75886 525 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 ENO3P13929 434 aaPredicted RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 ADORA2AP29274 412 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 TNFSF9P41273 254 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 ETV4P43268 484 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 PHKA2P46019 1235 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 PRAMEP78395 509 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 LSAMPQ13449 338 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 OLIG2Q13516 323 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 CUL2Q13617 745 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 DBN1Q16643 649 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 C15orf59Q2T9L4 293 aaPredicted RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 LRRC8BQ6P9F7 803 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 MOXD1Q6UVY6 613 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 FRMD7Q6ZUT3 714 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 ANO5Q75V66 913 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 LENG1Q96BZ8 264 aaPredicted RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 CCDC17Q96LX7 622 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 XAB2Q9HCS7 855 aaKnown RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 RBAKQ9NYW8 714 aaPredicted RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 DTNAQ9Y4J8 743 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 ASTN2O75129 1339 aaPredicted RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 BUD23O43709 281 aaKnown RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 ASLP04424 464 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 STT3AP46977 705 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 CDH6P55285 790 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 SESN2P58004 480 aaPredicted RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 TBL3Q12788 808 aaKnown RBP15.08■□□□□ 0
SFXN3-202ENST00000393459 CCNIQ14094 377 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 TMEM179Q6ZVK1 233 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 METTL25Q8N6Q8 603 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 RNF169Q8NCN4 708 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 HSFX1Q9UBD0 423 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 IP6K2Q9UHH9 426 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 STRIP2Q9ULQ0 834 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 BRCA2P51587 3418 aa15.08■□□□□ 0
SFXN3-202ENST00000393459 TM9SF1O15321 606 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 UQCRBP14927 111 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 HOXA7P31268 230 aaPredicted RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 CDH15P55291 814 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 FASTKD1Q53R41 847 aaKnown RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 DUS1LQ6P1R4 473 aaKnown RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 HHIPL2Q6UWX4 724 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 PDSS2Q86YH6 399 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 ZFP28Q8NHY6 868 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 MZB1Q8WU39 189 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 TFAP2BQ92481 460 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 MTMR12Q9C0I1 747 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 WDR55Q9H6Y2 383 aaPredicted RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 PCDH9Q9HC56 1237 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 APOBEC2Q9Y235 224 aaKnown RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 SYNJ2BP-COX16A0A087WUM0 186 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 GOLGA8TH3BQL2 631 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 MCF2LO15068 1137 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 CCNE2O96020 404 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 NUDT2P50583 147 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 DPYSL3Q14195 570 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 ATG14Q6ZNE5 492 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 NET1Q7Z628 596 aaPredicted RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 NAT8LQ8N9F0 302 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 UBA3Q8TBC4 463 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 FAM172AQ8WUF8 416 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 ZNF512Q96ME7 567 aaPredicted RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 IWS1Q96ST2 819 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 COX16Q9P0S2 106 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 NYAP2Q9P242 653 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 SHOC2Q9UQ13 582 aa15.07■□□□□ 0
SFXN3-202ENST00000393459 COL11A2P13942 1736 aaPredicted RBP15.07■□□□□ 0
SFXN3-202ENST00000393459 VNN1O95497 513 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 SRGAP2CP0DJJ0 459 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 SRGAP2BP0DMP2 458 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 ARSAP15289 507 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 COPAP53621 1224 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 ADARP55265 1226 aaKnown RBP15.06■□□□□ 0
SFXN3-202ENST00000393459 PSMC1P62191 440 aaKnown RBP15.06■□□□□ 0
SFXN3-202ENST00000393459 GTF2BQ00403 316 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.06■□□□□ 0
SFXN3-202ENST00000393459 PRMT6Q96LA8 375 aaPredicted RBP15.06■□□□□ 0
SFXN3-202ENST00000393459 FAM192AQ9GZU8 254 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.06■□□□□ 0
SFXN3-202ENST00000393459 POMPQ9Y244 141 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 HBS1LQ9Y450 684 aaKnown RBP15.06■□□□□ 0
SFXN3-202ENST00000393459 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
SFXN3-202ENST00000393459 A8MXQ7 604 aa15.06■□□□□ 0
SFXN3-202ENST00000393459 MT-CO1P00395 513 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms