RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 TMEM191CA6NGB0 347 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 PIK3R2O00459 728 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 DYNC1I1O14576 645 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 CCL16O15467 120 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 CEP104O60308 925 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 KCNA4P22459 653 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 MAN1A1P33908 653 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 CTNNA1P35221 906 aaKnown RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 SLC1A1P43005 524 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 MARCKSL1P49006 195 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 C2orf54Q08AI8 447 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 CBX2Q14781 532 aaPredicted RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 ELF2Q15723 593 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 ERCC6LQ2NKX8 1250 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 ATAT1Q5SQI0 421 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 FAM102AQ5T9C2 384 aaPredicted RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 DCAF12L1Q5VU92 463 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 OR6B2Q6IFH4 312 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 PMF1Q6P1K2 205 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 FAM183BPQ6ZVS7 135 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 RSRC2Q7L4I2 434 aaKnown RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 ZNF572Q7Z3I7 529 aaPredicted RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 MYCBPAPQ8TBZ2 947 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 SPPL2BQ8TCT7 592 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 SLC35F5Q8WV83 523 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 SMG7Q92540 1137 aaKnown RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 MCRS1Q96EZ8 462 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 YIPF1Q9Y548 306 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 PCDHB5Q9Y5E4 795 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 C5orf42Q9H799 3197 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 CCDC66A2RUB6 948 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 SIGLEC16A6NMB1 481 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 CLDN5O00501 218 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 HAPLN1P10915 354 aaPredicted RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 KRT3P12035 628 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 MTHFRP42898 656 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 SNX16P57768 344 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 ZNF252P-AS1Q0IIN9 211 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 JOSD2Q8TAC2 188 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 STK32AQ8WU08 396 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 ALG3Q92685 438 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 MYLPFQ96A32 169 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 PCED1BQ96HM7 432 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 RIPOR3Q96MK2 946 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 SLC4A5Q9BY07 1137 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 CARD9Q9H257 536 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 POMKQ9H5K3 350 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 KRT82Q9NSB4 513 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 ABI2Q9NYB9 513 aaPredicted RBP14.22□□□□□ -0.13
PTN-202ENST00000393083 FAM50BQ9Y247 325 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 USTQ9Y2C2 406 aa14.22□□□□□ -0.13
PTN-202ENST00000393083 VCANP13611 3396 aa14.21□□□□□ -0.13
PTN-202ENST00000393083 PGRMC1O00264 195 aaKnown RBP14.21□□□□□ -0.14
PTN-202ENST00000393083 XPO1O14980 1071 aaKnown RBP14.21□□□□□ -0.14
PTN-202ENST00000393083 SOAT2O75908 522 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 LRG1P02750 347 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 NPR3P17342 541 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 PLA2G4AP47712 749 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 TUFMP49411 452 aaKnown RBP14.21□□□□□ -0.14
PTN-202ENST00000393083 SLC8A3P57103 927 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 RNASE9P60153 205 aaKnown RBP14.21□□□□□ -0.14
PTN-202ENST00000393083 OGDHQ02218 1023 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 TWF1Q12792 350 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 MAPRE1Q15691 268 aaKnown RBP14.21□□□□□ -0.14
PTN-202ENST00000393083 TJAP1Q5JTD0 557 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 FAM35AQ86V20 835 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 ACTRT1Q8TDG2 376 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 FUBP3Q96I24 572 aaKnown RBP eCLIP14.21□□□□□ -0.14
PTN-202ENST00000393083 NECTIN4Q96NY8 510 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 B3GNT5Q9BYG0 378 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 WDR6Q9NNW5 1121 aaKnown RBP14.21□□□□□ -0.14
PTN-202ENST00000393083 CYLDQ9NQC7 956 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 PCDHA3Q9Y5H8 950 aa14.21□□□□□ -0.14
PTN-202ENST00000393083 XYLBO75191 536 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 FAM200BP0CF97 657 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 ATF6P18850 670 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 CYP2F1P24903 491 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 PSMA2P25787 234 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 RFC1P35251 1148 aaPredicted RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 ACADSBP45954 432 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 ZNF211Q13398 564 aaPredicted RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 PIGHQ14442 188 aaPredicted RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 MGAT5BQ3V5L5 792 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 SEL1L2Q5TEA6 688 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 DAB2IPQ5VWQ8 1189 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 C4orf50Q6ZRC1 276 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 PAQR9Q6ZVX9 377 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 GRASPQ7Z6J2 395 aaPredicted RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 TMEM110Q86TL2 294 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 SPATA2LQ8IUW3 424 aaPredicted RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 RASGEF1CQ8N431 466 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 EMC1Q8N766 993 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 NOA1Q8NC60 698 aaKnown RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 SEPT5Q99719 369 aaPredicted RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 DUSP16Q9BY84 665 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 PIDD1Q9HB75 910 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 HCFC1R1Q9NWW0 138 aa14.2□□□□□ -0.14
PTN-202ENST00000393083 DNMT3BQ9UBC3 853 aaKnown RBP14.2□□□□□ -0.14
PTN-202ENST00000393083 C2orf16Q68DN1 1984 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms