RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 ZCCHC18P0CG32 403 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 PDGFRAP16234 1089 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 YWHAGP61981 247 aaKnown RBP eCLIP12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 SURF1Q15526 300 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 AMHR2Q16671 573 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 SLC10A6Q3KNW5 377 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 SLC44A4Q53GD3 710 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 ANO7Q6IWH7 933 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 CCNJLQ8IV13 435 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 RIBC1Q8N443 379 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 NETO2Q8NC67 525 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 TCP10LQ8TDR4 215 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 KCNN1Q92952 543 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 CFAP36Q96G28 342 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 ARPC5LQ9BPX5 153 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 ATXN10Q9UBB4 475 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 TYROBPO43914 113 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 ARF4P18085 180 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 GPD2P43304 727 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 RCN2Q14257 317 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 CCDC142Q17RM4 750 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 FAM183BPQ6ZVS7 135 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 OTOAQ7RTW8 1153 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 POLNQ7Z5Q5 900 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 ATP11CQ8NB49 1132 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 DDX50Q9BQ39 737 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 BCO2Q9BYV7 579 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 PPEF2O14830 753 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 TMCC1O94876 653 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 MSH2P43246 934 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 DPYSL3Q14195 570 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 EFHC2Q5JST6 749 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 MAP7D3Q8IWC1 876 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 TEX9Q8N6V9 391 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 ZNF75CPQ92670 426 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 LHX5Q9H2C1 402 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 TNFSF13BQ9Y275 285 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 NUMBLQ9Y6R0 609 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 WDR90Q96KV7 1748 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 CFAP73A6NFT4 308 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 C2orf71A6NGG8 1288 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 KBTBD13C9JR72 458 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 C22orf31O95567 290 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 CYP2C8P10632 490 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PTPN7P35236 360 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 ATXN1P54253 815 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 DMPKQ09013 629 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PDK4Q16654 411 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 CA9Q16790 459 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 SULF1Q8IWU6 871 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PDIK1LQ8N165 341 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PTPRN2Q92932 1015 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 B3GNT5Q9BYG0 378 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 MIS12Q9H081 205 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 SMARCAD1Q9H4L7 1026 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PDZD7Q9H5P4 517 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 RABL2BQ9UNT1 228 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PRPF4O43172 522 aaKnown RBP eCLIP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 EDF1O60869 148 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 UBTFL6P0CB48 400 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 TFE3P19532 575 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 SP100P23497 879 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PPP6R3Q5H9R7 873 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 RNF43Q68DV7 783 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 CCDC62Q6P9F0 684 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 ILDR2Q71H61 639 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PLPPR4Q7Z2D5 763 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 PRPF39Q86UA1 669 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 TDRPQ86YL5 185 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 AGGF1Q8N302 714 aaeCLIP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 NLRP7Q8WX94 980 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 RAB6BQ9NRW1 208 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 HES2Q9Y543 173 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 DNAH12Q6ZR08 3092 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 ANK1P16157 1881 aa12.16□□□□□ -0.46
RAPGEF3-201ENST00000389212 APOC4-APOC2K7ER74 178 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 KCNN4O15554 427 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 HBP1O60381 514 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 APOC2P02655 101 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 ERFP50548 548 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 ROR1Q01973 937 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 MOGSQ13724 837 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 KRT81Q14533 505 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 PLEKHG4Q58EX7 1191 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 GRAMD4Q6IC98 578 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 CYP4V2Q6ZWL3 525 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 ACOT1Q86TX2 421 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 SCUBE3Q8IX30 993 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 CTAGE3PQ8IX95 158 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 RFWD2Q8NHY2 731 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 CXorf38Q8TB03 319 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 UCMAQ8WVF2 138 aa12.15□□□□□ -0.46
RAPGEF3-201ENST00000389212 UTP4Q969X6 686 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms