RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 TRAPPC11Q7Z392 1133 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 SETD7Q8WTS6 366 aaKnown RBP22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 DNASE2BQ8WZ79 361 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 LRIG1Q96JA1 1093 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 MRGPRX1Q96LB2 322 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 BBC3Q96PG8 261 aaPredicted RBP22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 CCSER2Q9H7U1 834 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 CLDN5O00501 218 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 CACNG3O60359 315 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 ZNF883P0CG24 379 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 CD6P30203 668 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 B3GALNT2Q8NCR0 500 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 COL26A1Q96A83 441 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 NACA2Q9H009 215 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 DPEP3Q9H4B8 488 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 COMMD8Q9NX08 183 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 IL37Q9NZH6 218 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 WDR35Q9P2L0 1181 aa22.64■■□□□ 1.21
CNEP1R1-201ENST00000389134 ATP8B3O60423 1300 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 NUMA1Q14980 2115 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 FRMD3A2A2Y4 597 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 A8MXQ7 604 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 CST3P01034 146 aaPredicted RBP22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 ZDHHC11BP0C7U3 371 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 TYRP14679 529 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 TNNC1P63316 161 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 WDR72Q3MJ13 1102 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 KIAA1324Q6UXG2 1013 aaKnown RBP22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 HTR3DQ70Z44 454 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 BRAPQ7Z569 592 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 METTL3Q86U44 580 aaKnown RBP22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 CBWD2Q8IUF1 395 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 SCAMP5Q8TAC9 235 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 ERLEC1Q96DZ1 483 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 BBS2Q9BXC9 721 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 KIAA1586Q9HCI6 787 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 CD93Q9NPY3 652 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 RAD54BQ9Y620 910 aa22.63■■□□□ 1.21
CNEP1R1-201ENST00000389134 KALRNO60229 2985 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 CKAP5Q14008 2032 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 MEI4A8MW99 385 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 PRRT4C9JH25 899 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 NEDD8-MDP1E9PL57 170 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 CER1O95813 267 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 IRF1P10914 325 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 IL27RAQ6UWB1 636 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 GLIS3Q8NEA6 775 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 CADM4Q8NFZ8 388 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 WBP2Q969T9 261 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 KCNK16Q96T55 309 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 CDC6Q99741 560 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 FGFBP2Q9BYJ0 223 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 SLC6A17Q9H1V8 727 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 PANK4Q9NVE7 773 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 WSB2Q9NYS7 404 aaPredicted RBP22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 MARK1Q9P0L2 795 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 TMEM131Q92545 1883 aa22.62■■□□□ 1.21
CNEP1R1-201ENST00000389134 TXLNAP40222 546 aa22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 SLC5A3P53794 718 aa22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 STXBP4Q6ZWJ1 553 aa22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 TOE1Q96GM8 510 aaKnown RBP22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 GAREM1Q9H706 876 aa22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 TM7SF3Q9NS93 570 aa22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 CACNA2D2Q9NY47 1150 aa22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 GMIPQ9P107 970 aa22.61■■□□□ 1.21
CNEP1R1-201ENST00000389134 FAM92AA1XBS5 289 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 NCAM1P13591 858 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 TNNI1P19237 187 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 MATKP42679 507 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 DGKGP49619 791 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 LARP1BQ659C4 914 aaKnown RBP22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 TPGS1Q6ZTW0 290 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 GALNT15Q8N3T1 639 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 ZCCHC9Q8N567 271 aaKnown RBP22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 BAHD1Q8TBE0 780 aaPredicted RBP22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 MIR1-1HGQ9H1L0 117 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 PRDM16Q9HAZ2 1276 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 DMAP1Q9NPF5 467 aaPredicted RBP22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 ITM2CQ9NQX7 267 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 HSPBP1Q9NZL4 362 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 PCDHGB2Q9Y5G2 931 aa22.6■■□□□ 1.21
CNEP1R1-201ENST00000389134 TLR5O60602 858 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 CILPO75339 1184 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 DKK1O94907 266 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 STAU1O95793 577 aaKnown RBP22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 DLATP10515 647 aaKnown RBP22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 ZNF132P52740 706 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 GOLGA8FQ08AF8 430 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 GOLGA8DPQ0D2H9 430 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 STARD3Q14849 445 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 DBX2Q6ZNG2 339 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 CCDC73Q6ZRK6 1079 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 FAM35AQ86V20 835 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 SMARCD1Q96GM5 515 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 TMX3Q96JJ7 454 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 MED10Q9BTT4 135 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 GPR174Q9BXC1 333 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 IL21RQ9HBE5 538 aa22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 TOR4AQ9NXH8 423 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms