RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 ATP11CQ8NB49 1132 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FANCBQ8NB91 859 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PUM2Q8TB72 1066 aaKnown RBP eCLIP-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GRIN3AQ8TCU5 1115 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GRHL3Q8TE85 626 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CHMP7Q8WUX9 453 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 DPF3Q92784 378 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SIPA1Q96FS4 1042 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PLPPR2Q96GM1 343 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SORT1Q99523 831 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 HSPB9Q9BQS6 159 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF2Q9BSG1 426 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 DCLK3Q9C098 648 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RSPH6AQ9H0K4 717 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 KLHL11Q9NVR0 708 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CACNG5Q9UF02 275 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 Q9UFV3 132 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FZD4Q9ULV1 537 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TELO2Q9Y4R8 837 aa-1.92□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GREB1LQ9C091 1923 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 IGLV4-60A0A075B6I1 120 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 A0A087WZY1 265 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 A0A0G2JNG1 304 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RPS10-NUDT3A0A1W2PQS6 291 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 POC1B-GALNT4F8VUJ3 575 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SH2B2O14492 632 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TGFB1I1O43294 461 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GTPBP6O43824 516 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ECM2O94769 699 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 USP1O94782 785 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ATG7O95352 703 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CFBP00751 764 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CHRM5P08912 532 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 VSIG10L2P0DP72 767 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RBP3P10745 1247 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ENO3P13929 434 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 DAOP14920 347 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 JUPP14923 745 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GNB3P16520 340 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CSRP1P21291 193 aaKnown RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ENPP1P22413 925 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 HOXC8P31273 242 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GTF2IP78347 998 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 IL13RA1P78552 427 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 LACTBP83111 547 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RPL24P83731 157 aaKnown RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 DOC2AQ14183 400 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 IGFBP7Q16270 282 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TTC39AQ5SRH9 613 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZBTB41Q5SVQ8 909 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 C9orf129Q5T035 196 aaKnown RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CD276Q5ZPR3 534 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TSHZ1Q6ZSZ6 1077 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLC29A4Q7RTT9 530 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MAVSQ7Z434 540 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CMTM4Q8IZR5 234 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 C17orf53Q8N3J3 647 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GALNT4Q8N4A0 578 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MAB21L3Q8N8X9 362 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZSCAN4Q8NAM6 433 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RELL2Q8NC24 303 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MAP4K1Q92918 833 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RFKQ969G6 155 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CTHRC1Q96CG8 243 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PGBD1Q96JS3 809 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FCRL3Q96P31 734 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RETNLBQ9BQ08 111 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 EFHD1Q9BUP0 239 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 WRAP53Q9BUR4 548 aaKnown RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FAM126AQ9BYI3 521 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PUS3Q9BZE2 481 aaKnown RBP-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 POLR1BQ9H9Y6 1135 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 LIN7BQ9HAP6 207 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FGF22Q9HCT0 170 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MMP25Q9NPA2 562 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 WDR70Q9NW82 654 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLC2A8Q9NY64 477 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FAM13BQ9NYF5 915 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RCAN3Q9UKA8 241 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLC8A2Q9UPR5 921 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 VWA7Q9Y334 891 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MOB4Q9Y3A3 225 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SNCAIPQ9Y6H5 919 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PKD1L1Q8TDX9 2849 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 C2CD3Q4AC94 2353 aa-1.93□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CSMD3Q7Z407 3707 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CCDC78A2IDD5 438 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 C7orf72A4D263 438 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 OR6C75A6NL08 312 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 USP27XA6NNY8 438 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GOLGA8BA8MQT2 603 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 HHLA1C9JL84 531 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MEIS1O00470 390 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 KLF11O14901 512 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SRPX2O60687 465 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MOCS3O95396 460 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PIGNO95427 931 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GSNP06396 782 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CHRM2P08172 466 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CHTF8P0CG12 524 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms