RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 FUT11Q495W5 492 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 MYO1HQ8N1T3 1032 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 SPIRE2Q8WWL2 714 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 TATDN2Q93075 761 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 DCLK3Q9C098 648 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 CLPBQ9H078 707 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 RAB21Q9UL25 225 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 SNX13Q9Y5W8 968 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 CAMSAP1Q5T5Y3 1602 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 A0A087WZ62 844 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 UBOX5O94941 541 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 ITGALP20701 1170 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 PTPN4P29074 926 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 SKIV2LQ15477 1246 aaKnown RBP16.53■□□□□ 0.24
COL2A1-202ENST00000380518 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 PNMA5Q96PV4 448 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 FDXACB1Q9BRP7 624 aaPredicted RBP16.53■□□□□ 0.24
COL2A1-202ENST00000380518 GPAMQ9HCL2 828 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 DIP2AQ14689 1571 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 MAGEB16A2A368 324 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 TGFB3P10600 412 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 IL1R1P14778 569 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 BGNP21810 368 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 LAMTOR4Q0VGL1 99 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 JADE3Q92613 823 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 FICDQ9BVA6 458 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 UBXN6Q9BZV1 441 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 RXFP1Q9HBX9 757 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 RAD54BQ9Y620 910 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 ADAMTS13Q76LX8 1427 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 RIPK2O43353 540 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 CXCL8P10145 99 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 CYP2F1P24903 491 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 NCALDP61601 193 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 OLFML2BQ68BL8 750 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 CCDC81Q6ZN84 652 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 COLGALT1Q8NBJ5 622 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 C2CD2LO14523 706 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 FKBP6O75344 327 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 IMPDH2P12268 514 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 ZNF268Q14587 947 aaPredicted RBP16.52■□□□□ 0.24
COL2A1-202ENST00000380518 SLC15A2Q16348 729 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 NFE2Q16621 373 aaPredicted RBP16.52■□□□□ 0.24
COL2A1-202ENST00000380518 SDE2Q6IQ49 451 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 BHMTQ93088 406 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 PALMDQ9NP74 551 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 AAASQ9NRG9 546 aa16.52■□□□□ 0.24
COL2A1-202ENST00000380518 PNMA8BQ9ULN7 279 aaPredicted RBP16.52■□□□□ 0.24
COL2A1-202ENST00000380518 PSMC3P17980 439 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 SERPINB1P30740 379 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 SREBF2Q12772 1141 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 NFYCQ13952 458 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 NFIL3Q16649 462 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 TMEM119Q4V9L6 283 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 MRPS31Q92665 395 aaKnown RBP16.52■□□□□ 0.23
COL2A1-202ENST00000380518 CPB2Q96IY4 423 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 DUSP9Q99956 384 aaKnown RBP16.52■□□□□ 0.23
COL2A1-202ENST00000380518 YIPF2Q9BWQ6 316 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 TLR10Q9BXR5 811 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 BARX2Q9UMQ3 279 aaPredicted RBP16.52■□□□□ 0.23
COL2A1-202ENST00000380518 DNALI1O14645 258 aaPredicted RBP16.52■□□□□ 0.23
COL2A1-202ENST00000380518 FCGRTP55899 365 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 MAP3K7CLP57077 242 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 BMPR2Q13873 1038 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 GALNTL6Q49A17 601 aa16.52■□□□□ 0.23
COL2A1-202ENST00000380518 ZBTB22O15209 634 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 CELF2O95319 508 aaKnown RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 MLNP12872 115 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 ANXA11P50995 505 aaKnown RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 MMRN1Q13201 1228 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 BTN2A2Q8WVV5 523 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 GANQ9H2C0 597 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 IL17RBQ9NRM6 502 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 VANGL2Q9ULK5 521 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 E9PBE3 544 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 HOXA2O43364 376 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 KLHL41O60662 606 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 TKTL1P51854 596 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 CNTN1Q12860 1018 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 PGM5Q15124 567 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 TRMT5Q32P41 509 aaKnown RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 EARS2Q5JPH6 523 aaKnown RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 PRR23D1E9PI22 279 aaPredicted RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 GLP2RO95838 553 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 PRR23D2P0DMB1 279 aaPredicted RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 EPB42P16452 691 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 SHMT1P34896 483 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 PLIN5Q00G26 463 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 CYP51A1Q16850 503 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 LRRC8DQ7L1W4 858 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 SH3GL1Q99961 368 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 INTS13Q9NVM9 706 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 TRPM5Q9NZQ8 1165 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 FRMPD1Q5SYB0 1578 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms