RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TSPAN9O75954 239 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SEC24DO94855 1032 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SPDYE6P0CI01 402 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ALAS1P13196 640 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ANXA13P27216 316 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 RPA3P35244 121 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PIK3CAP42336 1068 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 BMXP51813 675 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 NIPAL4Q0D2K0 466 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF211Q13398 564 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 MTMR2Q13614 643 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 RAPGEF1Q13905 1077 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 OXA1LQ15070 435 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 STILQ15468 1287 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 OASLQ15646 514 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ZYXQ15942 572 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 XRRA1Q6P2D8 792 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 PRR23CQ6ZRP0 262 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 DTX3Q8N9I9 347 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 GSDMBQ8TAX9 411 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SLC26A7Q8TE54 656 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 TBCKQ8TEA7 893 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 MAML1Q92585 1016 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 C12orf43Q96C57 262 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 ISOC1Q96CN7 298 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SEMA6BQ9H3T3 888 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 DDX4Q9NQI0 724 aaKnown RBP7.76□□□□□ -1.17
CDKL5-201ENST00000379989 FAM198AQ9UFP1 575 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 FEM1BQ9UK73 627 aa7.76□□□□□ -1.17
CDKL5-201ENST00000379989 SCN9AQ15858 1988 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 C2orf71A6NGG8 1288 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 PODXLO00592 558 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 FCHO1O14526 889 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 PRPF4O43172 522 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 MYO1DO94832 1006 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 COL6A1P12109 1028 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 EPS15P42566 896 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 PTK2Q05397 1052 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CDK18Q07002 472 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CCNIQ14094 377 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 PDK1Q15118 436 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TMED2Q15363 201 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 DLGAP5Q15398 846 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 STK11Q15831 433 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 LSM12Q3MHD2 195 aaKnown RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 GALNT13Q8IUC8 556 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 NPLOC4Q8TAT6 608 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 SNX29Q8TEQ0 813 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 THAP11Q96EK4 314 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CDHR1Q96JP9 859 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF641Q96N77 438 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TMEM120AQ9BXJ8 343 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 IMPG2Q9BZV3 1241 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 WNT8AQ9H1J5 351 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 Q9H521 79 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 PCDH12Q9NPG4 1184 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 PCYOX1Q9UHG3 505 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 RAB26Q9ULW5 256 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 RBBP6Q7Z6E9 1792 aaKnown RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CCNT1O60563 726 aaKnown RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 ENO1P06733 434 aaKnown RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 POLR2MP0CAP2 368 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 FCER1AP12319 257 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 BMP3P12645 472 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CHRNB2P17787 502 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CD247P20963 164 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 RPA1P27694 616 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 SREBF1P36956 1147 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TPTEP56180 551 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 B2MP61769 119 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 NR1H3Q13133 447 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 ITGADQ13349 1161 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CTTNQ14247 550 aaKnown RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 FAM91A1Q658Y4 838 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 AADACL2Q6P093 401 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TRABD2AQ86V40 505 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 NIM1KQ8IY84 436 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TRIML2Q8N7C3 387 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 PRELID2Q8N945 189 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 SLC44A5Q8NCS7 719 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 VPS37AQ8NEZ2 397 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TSPAN14Q8NG11 270 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 SDCCAG3Q96C92 435 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 NMUR2Q9GZQ4 415 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 MRPL11Q9Y3B7 192 aaKnown RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 FRMPD4Q14CM0 1322 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CROCCQ5TZA2 2017 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CFAP99D6REC4 459 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 SCO2O43819 266 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 KLHL2O95198 593 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 RAG1P15918 1043 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 KRT6CP48668 564 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 NKX2-5P52952 324 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF280AP59817 542 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TUBA3CQ13748 450 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 SLC35G1Q2M3R5 365 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 EFHC1Q5JVL4 640 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 HP1BP3Q5SSJ5 553 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 C10orf76Q5T2E6 689 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms