RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PLXNA1Q9UIW2 1896 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 PLXNB2O15031 1838 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 SIGLEC16A6NMB1 481 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 RPSAP08865 295 aaKnown RBP11.26□□□□□ -0.61
NEDD9-201ENST00000379433 AKR1A1P14550 325 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 TMED1Q13445 227 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 CA9Q16790 459 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 DCAF6Q58WW2 860 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 DARS2Q6PI48 645 aaKnown RBP11.26□□□□□ -0.61
NEDD9-201ENST00000379433 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
NEDD9-201ENST00000379433 FAM228AQ86W67 206 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 KATNAL2Q8IYT4 538 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 RCOR2Q8IZ40 523 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 TTC16Q8NEE8 873 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 PRELID1Q9Y255 219 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 ASGR1P07306 291 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 SDC4P31431 198 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 FNTAP49354 379 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 MAP3K7CLP57077 242 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 PITX1P78337 314 aaPredicted RBP11.26□□□□□ -0.61
NEDD9-201ENST00000379433 CNGA2Q16280 664 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 BBS9Q3SYG4 887 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 PYROXD2Q8N2H3 581 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 APBA2Q99767 749 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
NEDD9-201ENST00000379433 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 C2CD2Q9Y426 696 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 LOC285556D6RIA3 1793 aa11.26□□□□□ -0.61
NEDD9-201ENST00000379433 H0YGN5 161 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 CYB561D2O14569 222 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 RIPK2O43353 540 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 BEST1O76090 585 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 B3GAT3O94766 335 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 CLCNKBP51801 687 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 DCAF4L1Q3SXM0 396 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 MDH1BQ5I0G3 518 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 DSTYKQ6XUX3 929 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 UNC45BQ8IWX7 931 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 SRRM1Q8IYB3 904 aaKnown RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 ADGRF2Q8IZF7 708 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 GRK7Q8WTQ7 553 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 EMID1Q96A84 441 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 KCNK16Q96T55 309 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 SH3GL1Q99961 368 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 SEPT10Q9P0V9 454 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 NUDT5Q9UKK9 219 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 NFS1Q9Y697 457 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 TTC3P53804 2025 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 hCG_1818297A0A087WSY0 165 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 GPD1P21695 349 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 CDKN2BP42772 138 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 EIF3EP60228 445 aaKnown RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 ADIGQ0VDE8 80 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 KCNA10Q16322 511 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 FAM187BQ17R55 369 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 RNF187Q5TA31 235 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 CCSAPQ6IQ19 270 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 OSBPL10Q9BXB5 764 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 PPCSQ9HAB8 311 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 GGT7Q9UJ14 662 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 NEU2Q9Y3R4 380 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 SMIM35A0A1B0GVV1 85 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 PAPSS1O43252 624 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 LIASO43766 372 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 AVILO75366 819 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 KDELR1P24390 212 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 LSP1P33241 339 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 PDIA2Q13087 525 aaKnown RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 TMED2Q15363 201 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 SDCCAG8Q86SQ7 713 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 EDEM1Q92611 657 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 KLF6Q99612 283 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 NFKBIZQ9BYH8 718 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 MIOSQ9NXC5 875 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 UBQLN1Q9UMX0 589 aaKnown RBP11.25□□□□□ -0.61
NEDD9-201ENST00000379433 PCDHGC3Q9UN70 934 aa11.25□□□□□ -0.61
NEDD9-201ENST00000379433 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 GOLGA8RI6L899 631 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 PAEPP09466 180 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 TKTP29401 623 aaKnown RBP11.24□□□□□ -0.61
NEDD9-201ENST00000379433 MAGEA9P43362 315 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 TAF6P49848 677 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 LILRA4P59901 499 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 KLF1Q13351 362 aaPredicted RBP11.24□□□□□ -0.61
NEDD9-201ENST00000379433 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
NEDD9-201ENST00000379433 CCNG2Q16589 344 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 RUBCNQ92622 972 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 NELL1Q92832 810 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 ZNF518BQ9C0D4 1074 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 EPB41L4BQ9H329 900 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 AAASQ9NRG9 546 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 ASNSD1Q9NWL6 643 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 MFHAS1Q9Y4C4 1052 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 CAPN9O14815 690 aa11.24□□□□□ -0.61
NEDD9-201ENST00000379433 SPAG7O75391 227 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms