RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ADRB2P07550 413 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 CALB2P22676 271 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 THPOP40225 353 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 AMPD2Q01433 879 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 CNTN2Q02246 1040 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TDRD10Q5VZ19 366 aaKnown RBP19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 IRF2BP1Q8IU81 584 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 NUP93Q8N1F7 819 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ZC4H2Q9NQZ6 224 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PRG3Q9Y2Y8 225 aaPredicted RBP19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 NCAM2O15394 837 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 DGKIO75912 1065 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ELK3P41970 407 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RAP1GDS1P52306 607 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 MARSP56192 900 aaKnown RBP19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 NFIL3Q16649 462 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 MTDHQ86UE4 582 aaKnown RBP19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 NT5DC4Q86YG4 428 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 CCDC60Q8IWA6 550 aaPredicted RBP19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 MREGQ8N565 214 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RFWD2Q8NHY2 731 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 SGF29Q96ES7 293 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ABHD8Q96I13 439 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 OSMRQ99650 979 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 SNTG2Q9NY99 539 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ROBO3Q96MS0 1386 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 KNDC1Q76NI1 1749 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RHOBTB1O94844 696 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 THP07101 528 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 GRK2P25098 689 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 MAP3K7CLP57077 242 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TWF1Q12792 350 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 CCDC85BQ15834 202 aaPredicted RBP19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 GRIK4Q16099 956 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TMEM139Q8IV31 216 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TMEM120AQ9BXJ8 343 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 SELENONQ9NZV5 590 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 VPS9D1Q9Y2B5 631 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TOMM70O94826 608 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TM4SF1P30408 202 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 SLC30A9Q6PML9 568 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 COLGALT1Q8NBJ5 622 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TMEM161BQ8NDZ6 487 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 OPTNQ96CV9 577 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 CCDC126Q96EE4 140 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RIC8BQ9NVN3 520 aa19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 REXO2Q9Y3B8 237 aaKnown RBP19.3■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 BGNP21810 368 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PPATQ06203 517 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ECM1Q16610 540 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TTMPQ5BVD1 217 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PTRHD1Q6GMV3 140 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TMEM106CQ9BVX2 250 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 AQP5P55064 265 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 STX5Q13190 355 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ARHGEF7Q14155 803 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 FAR2Q96K12 515 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 P2RX7Q99572 595 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 LACTBL1A8MY62 500 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ACADSP16219 412 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TCN1P20061 433 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 MGAT5Q09328 741 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 STRA8Q7Z7C7 330 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 ZCCHC9Q8N567 271 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 IARS2Q9NSE4 1012 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PKD2L2Q9NZM6 624 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PCYOX1Q9UHG3 505 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 DSEQ9UL01 958 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PKP3Q9Y446 797 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PRRG1O14668 218 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TBC1D12O60347 775 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 HSPA1AP0DMV8 641 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 HSPA1BP0DMV9 641 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RCN1Q15293 331 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 KBTBD12Q3ZCT8 623 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 MRNIPQ6NTE8 343 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 DENND1BQ6P3S1 775 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 FAM32AQ9Y421 112 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 THRAP10827 490 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RALBP11234 206 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 NUDT2P50583 147 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TKTL1P51854 596 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 DMC1Q14565 340 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 IRF2BP2Q7Z5L9 587 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 IFNEQ86WN2 208 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RPRD1AQ96P16 312 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 SETD4Q9NVD3 440 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 GEMIN8Q9NWZ8 242 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RUVBL2Q9Y230 463 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 DNAJC16Q9Y2G8 782 aa19.29■□□□□ 0.68
CNTNAP3B-203ENST00000377561 CACNA1FO60840 1977 aa19.28■□□□□ 0.68
CNTNAP3B-203ENST00000377561 KCNA4P22459 653 aa19.28■□□□□ 0.68
CNTNAP3B-203ENST00000377561 SLC27A1Q6PCB7 646 aa19.28■□□□□ 0.68
CNTNAP3B-203ENST00000377561 HMGCRP04035 888 aa19.28■□□□□ 0.68
CNTNAP3B-203ENST00000377561 RPLP2P05387 115 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-203ENST00000377561 PTPRAP18433 802 aa19.28■□□□□ 0.68
CNTNAP3B-203ENST00000377561 CRY2Q49AN0 593 aa19.28■□□□□ 0.68
CNTNAP3B-203ENST00000377561 TMCO5AQ8N6Q1 288 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms