RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 KRT13P13646 458 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 HNRNPLP14866 589 aaKnown RBP eCLIP19.52■□□□□ 0.72
HDAC6-202ENST00000376610 ATP5C1P36542 298 aaKnown RBP19.52■□□□□ 0.72
HDAC6-202ENST00000376610 ASPAP45381 313 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 NOVA1P51513 510 aaKnown RBP19.52■□□□□ 0.72
HDAC6-202ENST00000376610 VAMP7P51809 220 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 PKP1Q13835 747 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 GRAMD4Q6IC98 578 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 SPOPLQ6IQ16 392 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 INTS8Q75QN2 995 aaKnown RBP19.52■□□□□ 0.72
HDAC6-202ENST00000376610 ETFBKMTQ8IXQ9 262 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 C12orf29Q8N999 325 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 TERB1Q8NA31 727 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 ZMIZ2Q8NF64 920 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 RLN3Q8WXF3 142 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 JAKMIP2Q96AA8 810 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 ZDHHC4Q9NPG8 344 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 HMGXB4Q9UGU5 601 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 TRAF3IP3Q9Y228 551 aa19.52■□□□□ 0.72
HDAC6-202ENST00000376610 BEST1O76090 585 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 NR2F2P24468 414 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 RPL13P26373 211 aaKnown RBP19.51■□□□□ 0.71
HDAC6-202ENST00000376610 SYKP43405 635 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 KRT85P78386 507 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 LMAN2Q12907 356 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 SPDYCQ5MJ68 293 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 SDE2Q6IQ49 451 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 HTR3DQ70Z44 454 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 TADA2BQ86TJ2 420 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 TMEM25Q86YD3 366 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 PHTF2Q8N3S3 785 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 HNRNPABQ99729 332 aaKnown RBP19.51■□□□□ 0.71
HDAC6-202ENST00000376610 NUSAP1Q9BXS6 441 aaKnown RBP19.51■□□□□ 0.71
HDAC6-202ENST00000376610 CYP3A43Q9HB55 503 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.51■□□□□ 0.711e-15■■■■■ 67.3
HDAC6-202ENST00000376610 WDR35Q9P2L0 1181 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 SCML2Q9UQR0 700 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 PCDHA5Q9Y5H7 936 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 PI4KAP42356 2102 aa19.51■□□□□ 0.71
HDAC6-202ENST00000376610 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 NEDD8-MDP1E9PL57 170 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 ADAM23O75077 832 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 KRT37O76014 449 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 ACO1P21399 889 aaKnown RBP19.5■□□□□ 0.71
HDAC6-202ENST00000376610 SHC2P98077 582 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 INCA1Q0VD86 236 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 TRIM61Q5EBN2 209 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 CLEC20AQ6ZU45 233 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 ARMCX6Q7L4S7 300 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 SYT12Q8IV01 421 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 TMEFF1Q8IYR6 380 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 CYFIP2Q96F07 1278 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 BBS2Q9BXC9 721 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 PNPLA8Q9NP80 782 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 CYLDQ9NQC7 956 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 DNAJC17Q9NVM6 304 aaKnown RBP19.5■□□□□ 0.71
HDAC6-202ENST00000376610 EVLQ9UI08 416 aaPredicted RBP19.5■□□□□ 0.71
HDAC6-202ENST00000376610 PLXND1Q9Y4D7 1925 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 USP24Q9UPU5 2620 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 LAMA1P25391 3075 aa19.5■□□□□ 0.71
HDAC6-202ENST00000376610 PATE3B3GLJ2 98 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 CYP26A1O43174 497 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 AP5Z1O43299 807 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 TBX18O95935 607 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 HOXB2P14652 356 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 NTSR1P30989 418 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 GCLMP48507 274 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 PSEN1P49768 467 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 LYSMD4Q5XG99 296 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 FAM186BQ8IYM0 893 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 KLF16Q9BXK1 252 aaPredicted RBP19.49■□□□□ 0.71
HDAC6-202ENST00000376610 NIF3L1Q9GZT8 377 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 MMRN2Q9H8L6 949 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 HPSEQ9Y251 543 aa19.49■□□□□ 0.71
HDAC6-202ENST00000376610 RHOBTB3O94955 611 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 CHRM1P11229 460 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-202ENST00000376610 RARGP13631 454 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 TYRP14679 529 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 CD58P19256 250 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 PSMC2P35998 433 aaKnown RBP19.48■□□□□ 0.71
HDAC6-202ENST00000376610 PLA2G4AP47712 749 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 IRX4P78413 519 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 ENPEPQ07075 957 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 NFIL3Q16649 462 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 MAP7D1Q3KQU3 841 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 UAP1L1Q3KQV9 507 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 C10orf120Q5SQS8 335 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 SH3PXD2AQ5TCZ1 1133 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 KLHDC10Q6PID8 442 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 SLC36A4Q6YBV0 504 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 TPGS1Q6ZTW0 290 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 CHPFQ8IZ52 775 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 TAS1R2Q8TE23 839 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 WBP2Q969T9 261 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 CCDC34Q96HJ3 373 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 CDK5RAP1Q96SZ6 601 aaKnown RBP19.48■□□□□ 0.71
HDAC6-202ENST00000376610 MARK1Q9P0L2 795 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 DNMT3LQ9UJW3 386 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 NAGPAQ9UK23 515 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms