RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 ZNF571Q7Z3V5 609 aaPredicted RBP20.87■□□□□ 0.93
DDR1-228ENST00000376575 DEPDC1BQ8WUY9 529 aa20.87■□□□□ 0.93
DDR1-228ENST00000376575 CPLX3Q8WVH0 158 aa20.87■□□□□ 0.93
DDR1-228ENST00000376575 CDK5RAP1Q96SZ6 601 aaKnown RBP20.87■□□□□ 0.93
DDR1-228ENST00000376575 DNAJC7Q99615 494 aa20.87■□□□□ 0.93
DDR1-228ENST00000376575 KXD1Q9BQD3 176 aa20.87■□□□□ 0.93
DDR1-228ENST00000376575 PDCL3Q9H2J4 239 aa20.87■□□□□ 0.93
DDR1-228ENST00000376575 CKMP06732 381 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 RALAP11233 206 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 PSMC3P17980 439 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 MMP8P22894 467 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 SNX16P57768 344 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 PTP4A2Q12974 167 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 USP4Q13107 963 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 ZNF77Q15935 545 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 NAA35Q5VZE5 725 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 OLFML1Q6UWY5 402 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 ZDHHC17Q8IUH5 632 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 DRC7Q8IY82 874 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 SLC30A5Q8TAD4 765 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 CPA5Q8WXQ8 436 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 KHSRPQ92945 711 aaKnown RBP eCLIP20.86■□□□□ 0.93
DDR1-228ENST00000376575 MIS12Q9H081 205 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 ABCC13Q9NSE7 274 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 ASNSD1Q9NWL6 643 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 MUTYHQ9UIF7 546 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 DUSP12Q9UNI6 340 aa20.86■□□□□ 0.93
DDR1-228ENST00000376575 BZW2Q9Y6E2 419 aaKnown RBP20.86■□□□□ 0.93
DDR1-228ENST00000376575 ARNTLO00327 626 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 LTFP02788 710 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 GLI1P08151 1106 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 ATP5C1P36542 298 aaKnown RBP20.85■□□□□ 0.93
DDR1-228ENST00000376575 SCNN1AP37088 669 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 KLHL30Q0D2K2 578 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 WDR59Q6PJI9 974 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 TADA2BQ86TJ2 420 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 ERICH1Q86X53 443 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 PHF13Q86YI8 300 aaPredicted RBP20.85■□□□□ 0.93
DDR1-228ENST00000376575 C18orf8Q96DM3 657 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 PIWIL1Q96J94 861 aaKnown RBP20.85■□□□□ 0.93
DDR1-228ENST00000376575 KLF16Q9BXK1 252 aaPredicted RBP20.85■□□□□ 0.93
DDR1-228ENST00000376575 SLC2A4RGQ9NR83 387 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 DNMT3LQ9UJW3 386 aa20.85■□□□□ 0.93
DDR1-228ENST00000376575 SERPING1P05155 500 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 SRFP11831 508 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 SKILP12757 684 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 GSCP56915 257 aaPredicted RBP20.84■□□□□ 0.93
DDR1-228ENST00000376575 BTBD8Q5XKL5 378 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 MSANTD2Q6P1R3 559 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 FAM183BPQ6ZVS7 135 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 XYLT1Q86Y38 959 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 UBALD2Q8IYN6 164 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 OR8K1Q8NGG5 319 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 BPIFB1Q8TDL5 484 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 IPO4Q8TEX9 1081 aaKnown RBP20.84■□□□□ 0.93
DDR1-228ENST00000376575 CPQQ9Y646 472 aa20.84■□□□□ 0.93
DDR1-228ENST00000376575 LEFTY2O00292 366 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 DDX3XO00571 662 aaKnown RBP eCLIP20.83■□□□□ 0.932e-8■■■■■ 32.9
DDR1-228ENST00000376575 GREM1O60565 184 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 MFAP3LO75121 409 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 MBL2P11226 248 aaPredicted RBP20.83■□□□□ 0.93
DDR1-228ENST00000376575 GZMAP12544 262 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 SLC6A3Q01959 620 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 TAF5Q15542 800 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 C10orf120Q5SQS8 335 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 SLC26A9Q7LBE3 791 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 TMC6Q7Z403 805 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 SH3RF2Q8TEC5 729 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 SLC2A13Q96QE2 648 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 TRMT61BQ9BVS5 477 aaKnown RBP20.83■□□□□ 0.93
DDR1-228ENST00000376575 SMOC2Q9H3U7 446 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 TRPV5Q9NQA5 729 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 OLA1Q9NTK5 396 aaKnown RBP20.83■□□□□ 0.93
DDR1-228ENST00000376575 ABHD10Q9NUJ1 306 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 ARHGAP20Q9P2F6 1191 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 NUDT5Q9UKK9 219 aa20.83■□□□□ 0.93
DDR1-228ENST00000376575 COL4A2P08572 1712 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 PI4K2BG5E9Z4 385 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 DPYSL4O14531 572 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 CHADO15335 359 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 NARSO43776 548 aaKnown RBP20.82■□□□□ 0.92
DDR1-228ENST00000376575 TNFAIP3P21580 790 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 YWHAZP63104 245 aaKnown RBP20.82■□□□□ 0.92
DDR1-228ENST00000376575 GPC5P78333 572 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 ZXDAP98168 799 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 EFHC1Q5JVL4 640 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 ACAD10Q6JQN1 1059 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 MON1BQ7L1V2 547 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 ARCQ7LC44 396 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 DDX42Q86XP3 938 aaKnown RBP eCLIP20.82■□□□□ 0.92
DDR1-228ENST00000376575 MSANTD4Q8NCY6 345 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 EDEM1Q92611 657 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 FAM83CQ9BQN1 747 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 TRIM62Q9BVG3 475 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 POPDC2Q9HBU9 364 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 CUL9Q8IWT3 2517 aa20.82■□□□□ 0.92
DDR1-228ENST00000376575 TNFRSF10AO00220 468 aa20.81■□□□□ 0.92
DDR1-228ENST00000376575 MDM4O15151 490 aa20.81■□□□□ 0.92
DDR1-228ENST00000376575 DCXO43602 365 aa20.81■□□□□ 0.92
DDR1-228ENST00000376575 HSF2BPO75031 334 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms