RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 MAGEB2O15479 319 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 DNAJC6O75061 913 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 FSBPO95073 299 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 TCN1P20061 433 aaPredicted RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 DRD4P21917 467 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 ARFIP2P53365 341 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 OAZ1P54368 228 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 BIRC2Q13490 618 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 TP53INP2Q8IXH6 220 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 PPIL6Q8IXY8 311 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 FBXO6Q9NRD1 293 aaPredicted RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 DDX43Q9NXZ2 648 aaKnown RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 MAP3K20Q9NYL2 800 aaKnown RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 ZFATQ9P243 1243 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 PSMC3IPQ9P2W1 217 aaPredicted RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 SIX4Q9UIU6 781 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 ZMPSTE24O75844 475 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 SMIM10L2AP0DMW4 78 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 SMIM10L2BP0DMW5 78 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 ERVK-10P10266 1014 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 MBTD1Q05BQ5 628 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 AZIN2Q96A70 460 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 WHRNQ9P202 907 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 DOCK2Q92608 1830 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 VDRP11473 427 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 SLC12A2P55011 1212 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 MYLK4Q86YV6 388 aaPredicted RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
DDR1-227ENST00000376570 RNF148Q8N7C7 305 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 FAM161BQ96MY7 647 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 CNPY3Q9BT09 278 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 MROH8Q9H579 483 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 LRRC19Q9H756 370 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 HEY2Q9UBP5 337 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 RPS6KL1Q9Y6S9 549 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 CNTNAP2Q9UHC6 1331 aa12.11□□□□□ -0.47
DDR1-227ENST00000376570 IQANK1A0A1B0GTG1 560 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 MEI4A8MW99 385 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 EEF2KO00418 725 aaKnown RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 CCL22O00626 93 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 ZC3H11AO75152 810 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDR1-227ENST00000376570 KRT37O76014 449 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 TMEM63AO94886 807 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 MGAT1P26572 445 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 ASPAP45381 313 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 RNF139Q8WU17 664 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 ZMAT2Q96NC0 199 aaKnown RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 TBCBQ99426 244 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 TSSK1BQ9BXA7 367 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 ULBP1Q9BZM6 244 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 SARS2Q9NP81 518 aaKnown RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 GYG2O15488 501 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 ATP6V1G2O95670 118 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 PIRTP0C851 137 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 DPYSL3Q14195 570 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 CROCCP2Q86T23 111 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 RASSF3Q86WH2 238 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 C12orf56Q8IXR9 622 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 BRI3BPQ8WY22 251 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 TRIM55Q9BYV6 548 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 RSAD1Q9HA92 442 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 C9IYK1 514 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 CXCL11O14625 94 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 MDM4O15151 490 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 PAPSS1O43252 624 aaPredicted RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 SOAT2O75908 522 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 IL18RAPO95256 599 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 EIF4BP23588 611 aaKnown RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 CASP2P42575 452 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 TAF6P49848 677 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 GEMIN4P57678 1058 aaKnown RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 GJA9P57773 515 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 ANO4Q32M45 955 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 URB1O60287 2271 aaKnown RBP12.1□□□□□ -0.47
DDR1-227ENST00000376570 NFASCO94856 1347 aa12.1□□□□□ -0.47
DDR1-227ENST00000376570 TTC24A2A3L6 582 aaPredicted RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 H0YGN5 161 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 MAPK13O15264 365 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 IRF1P10914 325 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 PTK6Q13882 451 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 MFSD10Q14728 455 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 POU6F1Q14863 301 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms