RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KANSL3Q9P2N6 904 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 PSMC3IPQ9P2W1 217 aaPredicted RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 RSPH14Q9UHP6 348 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CYTH4Q9UIA0 394 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ZNF180Q9UJW8 692 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ZMYND8Q9ULU4 1186 aaPredicted RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 R3HDM2Q9Y2K5 976 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 EVPLQ92817 2033 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 IQANK1A0A1B0GTG1 560 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 TLDC2A0PJX2 215 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 FAM47DPA6NHR8 397 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 H3BRJ5 948 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 TULP2O00295 520 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 IGF2BP3O00425 579 aaKnown RBP eCLIP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 PSMD3O43242 534 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 TREHO43280 583 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ZWINTO95229 277 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 EOMESO95936 686 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 CYP11A1P05108 521 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 GSTA1P08263 222 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 FAM200BP0CF97 657 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ODC1P11926 461 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 CYBAP13498 195 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 KRT10P13645 584 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 PTPN1P18031 435 aaKnown RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 MX2P20592 715 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 FGFR4P22455 802 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 RAP1GAPP47736 663 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 CTCFP49711 727 aaPredicted RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 MRPS5P82675 430 aaKnown RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 GUCY1A3Q02108 690 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 PDE4CQ08493 712 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 SCAPQ12770 1279 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 SMARCB1Q12824 385 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 KYNUQ16719 465 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ANKRD20A8PQ5CZ79 823 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 GNASQ5JWF2 1037 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 TMEM63BQ5T3F8 832 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 GJC2Q5T442 439 aaPredicted RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 KAZNQ674X7 775 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 PMF1Q6P1K2 205 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 DARS2Q6PI48 645 aaKnown RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 BNIPLQ7Z465 357 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ACOT1Q86TX2 421 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 PALM2Q8IXS6 379 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 HS6ST3Q8IZP7 471 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 THEM5Q8N1Q8 247 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 SH2D3CQ8N5H7 860 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 OTUD6BQ8N6M0 293 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ARFGAP1Q8N6T3 406 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 PLD5Q8N7P1 536 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 FAM172AQ8WUF8 416 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 KBTBD7Q8WVZ9 684 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ATG4AQ8WYN0 398 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 PRCCQ92733 491 aaPredicted RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 MAGEB18Q96M61 343 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 SMC6Q96SB8 1091 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 FTHL17Q9BXU8 183 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 EIF2AQ9BY44 585 aaKnown RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 SENP6Q9GZR1 1112 aaPredicted RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 RETREG1Q9H6L5 497 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 ACSS3Q9H6R3 686 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 POPDC2Q9HBU9 364 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 LRRC4Q9HBW1 653 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 FAM105AQ9NUU6 356 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 EURLQ9NYK6 297 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 RRP15Q9Y3B9 282 aaKnown RBP9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 IKBKGQ9Y6K9 419 aa9.07□□□□□ -0.96
SNRNP40-202ENST00000373720 A0A0U1RQF3 1178 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 MAGEB16A2A368 324 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 PI4K2BG5E9Z4 385 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 CYB561D2O14569 222 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 PAPSS1O43252 624 aaPredicted RBP9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 ATP5HO75947 161 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 ZBED1O96006 694 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 ATP5BP06576 529 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 C6orf222P0C671 652 aaPredicted RBP9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 BRAFP15056 766 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 CHN1P15882 459 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 PECAM1P16284 738 aaPredicted RBP9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 KRT15P19012 456 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 TYMPP19971 482 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 IL1R2P27930 398 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 SERPINB6P35237 376 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 CCT5P48643 541 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 GRIK3Q13003 919 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 NOGQ13253 232 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 FRG1Q14331 258 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 PDK1Q15118 436 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 LACTB2Q53H82 288 aaPredicted RBP9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 C2CD6Q53TS8 623 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 SLC45A4Q5BKX6 768 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 DCLRE1AQ6PJP8 1040 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 THSD4Q6ZMP0 1018 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 PIGWQ7Z7B1 504 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 RNF180Q86T96 592 aa9.06□□□□□ -0.96
SNRNP40-202ENST00000373720 EXOC3L1Q86VI1 746 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms