RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 IL1R1P14778 569 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 JUNDP17535 347 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 NCF2P19878 526 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 FGFR3P22607 806 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PMLP29590 882 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GNA15P30679 374 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ALDH1B1P30837 517 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 YWHABP31946 246 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GTF2H1P32780 548 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 RFC1P35251 1148 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 NPTX2P47972 431 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 MAPK10P53779 464 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PKNOX1P55347 436 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 NOMO3P69849 1222 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 IGBP1P78318 339 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CDKL1Q00532 357 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CENPCQ03188 943 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PTP4A2Q12974 167 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CYTH1Q15438 398 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CMPK2Q5EBM0 449 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PPM1LQ5SGD2 360 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 C1orf228Q6PIY5 440 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ARPINQ7Z6K5 226 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 OGFOD1Q8N543 542 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 SMC1BQ8NDV3 1235 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ZFP28Q8NHY6 868 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ZSCAN18Q8TBC5 510 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 FAM110BQ8TC76 370 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PRPF18Q99633 342 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CCDC106Q9BWC9 280 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PLVAPQ9BX97 442 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CALN1Q9BXU9 219 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 UNKQ9C0B0 810 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 S100A14Q9HCY8 104 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 TUFT1Q9NNX1 390 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 GPATCH2LQ9NWQ4 482 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 DDX43Q9NXZ2 648 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 LARSQ9P2J5 1176 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PDP2Q9P2J9 529 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 SBF2Q86WG5 1849 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ATP8B3O60423 1300 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CLRN2A0PK11 232 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 HMX2A2RU54 273 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 E9PBE3 544 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 TNFRSF10AO00220 468 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 COPEO14579 308 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ABLIM1O14639 778 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 XPO1O14980 1071 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 TBX3O15119 743 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 SPTLC1O15269 473 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 KLHL41O60662 606 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CIB2O75838 187 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 EDN1P05305 212 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 HNRNPCP07910 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ABHD2P08910 425 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PAX3P23760 479 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CRABP2P29373 138 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CIITAP33076 1130 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CDKN2BP42772 138 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 SLC1A1P43005 524 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 RAP1GAPP47736 663 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 VCPP55072 806 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 AP2B1P63010 937 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 MAP3K10Q02779 954 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CAV1Q03135 178 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CD300CQ08708 224 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 TBL3Q12788 808 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 MED21Q13503 144 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 OLIG2Q13516 323 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 DLGAP5Q15398 846 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CLUL1Q15846 466 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 SLC15A2Q16348 729 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 NRF1Q16656 503 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CCDC142Q17RM4 750 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ABCB5Q2M3G0 1257 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PPM1JQ5JR12 505 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 IL31Q6EBC2 164 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 DCUN1D2Q6PH85 259 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CES3Q6UWW8 571 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 FAM196AQ6ZSG2 479 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 FRMD7Q6ZUT3 714 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 SH2D5Q6ZV89 423 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 TMC7Q7Z402 723 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 DHDDSQ86SQ9 333 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 RBM12BQ8IXT5 1001 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 KATNAL2Q8IYT4 538 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 DEFB107AQ8IZN7 70 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 NAT8LQ8N9F0 302 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 RNF169Q8NCN4 708 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 FAM172AQ8WUF8 416 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 TFAP2BQ92481 460 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 PLEKHG4BQ96PX9 1271 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 HAPLN3Q96S86 360 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CEP41Q9BYV8 373 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 RNPEPQ9H4A4 650 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 ACSS3Q9H6R3 686 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 CNTN3Q9P232 1028 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 STRIP2Q9ULQ0 834 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 TBX20Q9UMR3 447 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms