RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 SCUBE3Q8IX30 993 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 CELF5Q8N6W0 485 aaKnown RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 IPO4Q8TEX9 1081 aaKnown RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 USP13Q92995 863 aaPredicted RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 CDK5RAP1Q96SZ6 601 aaKnown RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 KXD1Q9BQD3 176 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 RPP25Q9BUL9 199 aaKnown RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 NACA2Q9H009 215 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 RNF38Q9H0F5 515 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 SMG9Q9H0W8 520 aaKnown RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 SYNCQ9H7C4 482 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 KIF9Q9HAQ2 790 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 TDP1Q9NUW8 608 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 OBP2AQ9NY56 170 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 MYO10Q9HD67 2058 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 YJEFN3A6XGL0 299 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 E7ENQ6 273 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 ARHGAP6O43182 974 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 PAPSS1O43252 624 aaPredicted RBP16.7■□□□□ 0.26
PFDN4-201ENST00000371419 COCHO43405 550 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 CYP1A1P04798 512 aaPredicted RBP16.7■□□□□ 0.26
PFDN4-201ENST00000371419 SLC7A9P82251 487 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 KLHL30Q0D2K2 578 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 TDGQ13569 410 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 PTPN20Q4JDL3 420 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 NAA35Q5VZE5 725 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 TADA2BQ86TJ2 420 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 ERICH1Q86X53 443 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 CNGA4Q8IV77 575 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 SLC44A3Q8N4M1 653 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 ZNF276Q8N554 614 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 MSANTD4Q8NCY6 345 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 GOLGA1Q92805 767 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 PANX2Q96RD6 677 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 HAUS4Q9H6D7 363 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 SEPT11Q9NVA2 429 aaKnown RBP16.7■□□□□ 0.26
PFDN4-201ENST00000371419 ARHGAP26Q9UNA1 814 aa16.7■□□□□ 0.26
PFDN4-201ENST00000371419 NUP210Q8TEM1 1887 aaPredicted RBP16.7■□□□□ 0.26
PFDN4-201ENST00000371419 HEPACAM2A8MVW5 462 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 KIF2AO00139 706 aaPredicted RBP16.69■□□□□ 0.26
PFDN4-201ENST00000371419 MBL2P11226 248 aaPredicted RBP16.69■□□□□ 0.26
PFDN4-201ENST00000371419 ATP5C1P36542 298 aaKnown RBP16.69■□□□□ 0.26
PFDN4-201ENST00000371419 BSPRYQ5W0U4 402 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 BTBD8Q5XKL5 378 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 KLHDC10Q6PID8 442 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 MFSD6LQ8IWD5 586 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 CCAR2Q8N163 923 aaKnown RBP16.69■□□□□ 0.26
PFDN4-201ENST00000371419 TC2NQ8N9U0 490 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 CPA5Q8WXQ8 436 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 RSPRY1Q96DX4 576 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 PCDHB18PQ96TA0 734 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 BAG1Q99933 345 aaPredicted RBP16.69■□□□□ 0.26
PFDN4-201ENST00000371419 SYT11Q9BT88 431 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 PLA2G2FQ9BZM2 168 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 ABCC13Q9NSE7 274 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 TJP2Q9UDY2 1190 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 SORCS3Q9UPU3 1222 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 CCL26Q9Y258 94 aa16.69■□□□□ 0.26
PFDN4-201ENST00000371419 BZW2Q9Y6E2 419 aaKnown RBP16.69■□□□□ 0.26
PFDN4-201ENST00000371419 TBX18O95935 607 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 LTFP02788 710 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 TUBB4AP04350 444 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 ERBB2P04626 1255 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 UNGP13051 313 aaPredicted RBP16.68■□□□□ 0.26
PFDN4-201ENST00000371419 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 CLEC16AQ2KHT3 1053 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 C10orf120Q5SQS8 335 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 VITQ6UXI7 678 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 RSRC2Q7L4I2 434 aaKnown RBP16.68■□□□□ 0.26
PFDN4-201ENST00000371419 ZNF571Q7Z3V5 609 aaPredicted RBP16.68■□□□□ 0.26
PFDN4-201ENST00000371419 ZDHHC17Q8IUH5 632 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 DEPDC1BQ8WUY9 529 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 C18orf8Q96DM3 657 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 MUTYHQ9UIF7 546 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 DNMT3LQ9UJW3 386 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 CPQQ9Y646 472 aa16.68■□□□□ 0.26
PFDN4-201ENST00000371419 SERPING1P05155 500 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 PSMC3P17980 439 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 HNRNPH3P31942 346 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 NSFP46459 744 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 GABRB2P47870 512 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 CENPCQ03188 943 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 TDRD12Q587J7 1177 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 OR6B2Q6IFH4 312 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 HFE2Q6ZVN8 426 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 BPIFB1Q8TDL5 484 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 SH3RF2Q8TEC5 729 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 RNF139Q8WU17 664 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 EDEM1Q92611 657 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 DNAJC7Q99615 494 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 TRIM62Q9BVG3 475 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 COL25A1Q9BXS0 654 aaPredicted RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 OLA1Q9NTK5 396 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 SMPD4Q9NXE4 827 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms