RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 SF3B1O75533 1304 aaKnown RBP eCLIP17.52■□□□□ 0.43e-6■■■■■ 30.3
DKC1-201ENST00000369550 ARHGAP10A1A4S6 786 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 BTBD19C9JJ37 291 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 SIN3BO75182 1162 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 LYPLA1O75608 230 aaPredicted RBP17.52■□□□□ 0.39
DKC1-201ENST00000369550 RFPL1O75677 317 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 KRT38O76015 456 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 ACOT2P49753 483 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 DCTN2Q13561 401 aaKnown RBP17.52■□□□□ 0.39
DKC1-201ENST00000369550 MROH9Q5TGP6 573 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 MARVELD2Q8N4S9 558 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 RAB3IL1Q8TBN0 382 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 SPATA18Q8TC71 538 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 SUDS3Q9H7L9 328 aaPredicted RBP17.52■□□□□ 0.39
DKC1-201ENST00000369550 DMTF1Q9Y222 760 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 SSX2IPQ9Y2D8 614 aa17.52■□□□□ 0.39
DKC1-201ENST00000369550 MYH9P35579 1960 aaKnown RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 KRT7P08729 469 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 CD48P09326 243 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 BTKQ06187 659 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 SFSWAPQ12872 951 aaKnown RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 PEX6Q13608 980 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 PGM2L1Q6PCE3 622 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 RSPH3Q86UC2 560 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 MMP19Q99542 508 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 MRPL1Q9BYD6 325 aaKnown RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 MRPS26Q9BYN8 205 aaKnown RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 IFT122Q9HBG6 1241 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 UBAP1Q9NZ09 502 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 ITGA11Q9UKX5 1188 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 TTLL3Q9Y4R7 772 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 CASQ2O14958 399 aaPredicted RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 UGT1A9O60656 530 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 LYPLA2O95372 231 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 TNFAIP8O95379 198 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 VNN1O95497 513 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 NCF2P19878 526 aaPredicted RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 GARTP22102 1010 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 SNAPC2Q13487 334 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 ZNF394Q53GI3 561 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 WDR78Q5VTH9 848 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 DARS2Q6PI48 645 aaKnown RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 POLNQ7Z5Q5 900 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 KCTD6Q8NC69 237 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 IL31RAQ8NI17 732 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 PRPF31Q8WWY3 499 aaKnown RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 CMTM5Q96DZ9 223 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 PRPF18Q99633 342 aaKnown RBP17.51■□□□□ 0.39
DKC1-201ENST00000369550 CALN1Q9BXU9 219 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 UGT1A7Q9HAW7 530 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 UGT1A10Q9HAW8 530 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 UGT1A8Q9HAW9 530 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 TMEM165Q9HC07 324 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 BTBD7Q9P203 1132 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 EFR3BQ9Y2G0 817 aa17.51■□□□□ 0.39
DKC1-201ENST00000369550 TTLL13PA6NNM8 815 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 DENRO43583 198 aaKnown RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 TOP3BO95985 862 aaKnown RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 C4BPAP04003 597 aaKnown RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 SRGAP2CP0DJJ0 459 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 SRGAP2BP0DMP2 458 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 KDELR1P24390 212 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 TBXAS1P24557 533 aaPredicted RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 WNT7BP56706 349 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 MTMR1Q13613 665 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 KRT81Q14533 505 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 HADHQ16836 314 aaKnown RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 MYLK3Q32MK0 819 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 OGFRL1Q5TC84 451 aaPredicted RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 IYDQ6PHW0 289 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 ARCQ7LC44 396 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 C4orf19Q8IY42 314 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 FBXW8Q8N3Y1 598 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 SIKE1Q9BRV8 207 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 AGO4Q9HCK5 861 aaKnown RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 ZNF180Q9UJW8 692 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 BLOC1S6Q9UL45 172 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 PTPRJQ12913 1337 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 BIRC5O15392 142 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 CSDE1O75534 798 aaKnown RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 IL1R2P27930 398 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 LIG4P49917 911 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 ROR1Q01973 937 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 TAP1Q03518 808 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 FASTKD1Q53R41 847 aaKnown RBP17.5■□□□□ 0.39
DKC1-201ENST00000369550 TMEM35BQ8NCS4 154 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 RAB6BQ9NRW1 208 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 PCSK1NQ9UHG2 260 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 PCDHGB4Q9UN71 923 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 NUB1Q9Y5A7 615 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 PCDHGB5Q9Y5G0 923 aa17.5■□□□□ 0.39
DKC1-201ENST00000369550 H3BNX3 289 aa17.49■□□□□ 0.39
DKC1-201ENST00000369550 EXTL3O43909 919 aa17.49■□□□□ 0.39
DKC1-201ENST00000369550 DNAJA2O60884 412 aa17.49■□□□□ 0.39
DKC1-201ENST00000369550 ZMPSTE24O75844 475 aa17.49■□□□□ 0.39
DKC1-201ENST00000369550 SERPINB8P50452 374 aa17.49■□□□□ 0.39
DKC1-201ENST00000369550 TUBB3Q13509 450 aa17.49■□□□□ 0.39
DKC1-201ENST00000369550 PSMD6Q15008 389 aa17.49■□□□□ 0.39
DKC1-201ENST00000369550 TKFCQ3LXA3 575 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms