RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 LSM14BQ9BX40 385 aaKnown RBP19.44■□□□□ 0.7
CHTOP-202ENST00000368687 FOXQ1Q9C009 403 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 EBF3Q9H4W6 596 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 SMPD4Q9NXE4 827 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 CFAP97Q9P2B7 532 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 STRIP2Q9ULQ0 834 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 SYCE3A1L190 88 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 PI15O43692 258 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 HOXD11P31277 338 aaPredicted RBP19.43■□□□□ 0.7
CHTOP-202ENST00000368687 PTPN5P54829 565 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 COG7P83436 770 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 TNK2Q07912 1038 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 KCNMA1Q12791 1236 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 EML3Q32P44 896 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 SCD5Q86SK9 330 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 CLDN23Q96B33 292 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 ZFRQ96KR1 1074 aaKnown RBP19.43■□□□□ 0.7
CHTOP-202ENST00000368687 ZSWIM1Q9BR11 485 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 STK33Q9BYT3 514 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 ULBP1Q9BZM6 244 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 ECT2Q9H8V3 914 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 NMUR1Q9HB89 426 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 HPS4Q9NQG7 708 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 PCDHGC3Q9UN70 934 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 WNT6Q9Y6F9 365 aa19.43■□□□□ 0.7
CHTOP-202ENST00000368687 TULP2O00295 520 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 ADH1CP00326 375 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 TARSP26639 723 aaKnown RBP19.42■□□□□ 0.7
CHTOP-202ENST00000368687 KRT9P35527 623 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 GPD2P43304 727 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 RPL34P49207 117 aaKnown RBP19.42■□□□□ 0.7
CHTOP-202ENST00000368687 ZXDBP98169 803 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 UBXN1Q04323 297 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 DRAP1Q14919 205 aaPredicted RBP19.42■□□□□ 0.7
CHTOP-202ENST00000368687 FILIP1LQ4L180 1135 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 DGKKQ5KSL6 1271 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 BTBD8Q5XKL5 378 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 PMF1Q6P1K2 205 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 FMNL3Q8IVF7 1028 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 DHX40Q8IX18 779 aaKnown RBP19.42■□□□□ 0.7
CHTOP-202ENST00000368687 SYNPOQ8N3V7 929 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 DTWD2Q8NBA8 298 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 CCDC26Q8TAB7 109 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 RIN3Q8TB24 985 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 ERGIC2Q96RQ1 377 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 NAA15Q9BXJ9 866 aaKnown RBP19.42■□□□□ 0.7
CHTOP-202ENST00000368687 LHX5Q9H2C1 402 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 ABCC13Q9NSE7 274 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 OSER1Q9NX31 292 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 ZNF510Q9Y2H8 683 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 FHOD1Q9Y613 1164 aa19.42■□□□□ 0.7
CHTOP-202ENST00000368687 FOXN3O00409 490 aaPredicted RBP19.41■□□□□ 0.7
CHTOP-202ENST00000368687 DAOAP59103 153 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 APBA1Q02410 837 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 GRSF1Q12849 480 aaKnown RBP eCLIP19.41■□□□□ 0.7
CHTOP-202ENST00000368687 TRIM68Q6AZZ1 485 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 DPY19L2P1Q6NXN4 242 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 HTR3DQ70Z44 454 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 RNF139Q8WU17 664 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 PHOX2BQ99453 314 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 KLF16Q9BXK1 252 aaPredicted RBP19.41■□□□□ 0.7
CHTOP-202ENST00000368687 DCLK3Q9C098 648 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 HSD3B7Q9H2F3 369 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 DLGAP2Q9P1A6 1054 aa19.41■□□□□ 0.7
CHTOP-202ENST00000368687 F8VZ95 297 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 DCNP07585 359 aaKnown RBP19.4■□□□□ 0.7
CHTOP-202ENST00000368687 LCP1P13796 627 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 ARSAP15289 507 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 CD72P21854 359 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 PGFP49763 221 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 PREPLQ4J6C6 727 aaPredicted RBP19.4■□□□□ 0.7
CHTOP-202ENST00000368687 NEK11Q8NG66 645 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 PCMTD1Q96MG8 357 aaPredicted RBP19.4■□□□□ 0.7
CHTOP-202ENST00000368687 ST7Q9NRC1 585 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 FAM207AQ9NSI2 230 aaPredicted RBP19.4■□□□□ 0.7
CHTOP-202ENST00000368687 MARCH2Q9P0N8 246 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 NDRG2Q9UN36 371 aaKnown RBP19.4■□□□□ 0.7
CHTOP-202ENST00000368687 SIK3Q9Y2K2 1263 aa19.4■□□□□ 0.7
CHTOP-202ENST00000368687 SHISA7A6NL88 538 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 TRDMT1O14717 391 aaKnown RBP19.39■□□□□ 0.69
CHTOP-202ENST00000368687 TBX18O95935 607 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 DRD1P21728 446 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 GJA4P35212 333 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 CLCN1P35523 988 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 EIF2DP41214 584 aaKnown RBP19.39■□□□□ 0.69
CHTOP-202ENST00000368687 RGS7P49802 495 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 PPP2R5DQ14738 602 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 SYCP1Q15431 976 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 ZSCAN23Q3MJ62 389 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 BSPRYQ5W0U4 402 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 MAMSTRQ6ZN01 415 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 BEND5Q7L4P6 421 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 BHLHA9Q7RTU4 235 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 TMEM110Q86TL2 294 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 ZNF677Q86XU0 584 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 ADGRG2Q8IZP9 1017 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 ZNF687Q8N1G0 1237 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 SPAG5Q96R06 1193 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 SLC4A5Q9BY07 1137 aa19.39■□□□□ 0.69
CHTOP-202ENST00000368687 MIS12Q9H081 205 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms