RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 DARSP14868 501 aaKnown RBP9.3□□□□□ -0.92
TPM3-213ENST00000368545 MAGEA1P43355 309 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 CYP27A1Q02318 531 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 GFPT1Q06210 699 aaPredicted RBP9.3□□□□□ -0.92
TPM3-213ENST00000368545 C19orf57Q0VDD7 668 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 BFSP2Q13515 415 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 ARHGAP44Q17R89 818 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 DUOXA2Q1HG44 320 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 EEF1DP3Q658K8 133 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 ZNF571Q7Z3V5 609 aaPredicted RBP9.3□□□□□ -0.92
TPM3-213ENST00000368545 SESTD1Q86VW0 696 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 THNSL1Q8IYQ7 743 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 SHC3Q92529 594 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 ANKRD36BP1Q96IX9 119 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 KLHL25Q9H0H3 589 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 TJP2Q9UDY2 1190 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 TRHDEQ9UKU6 1024 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 GUCA1BQ9UMX6 200 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 PTPRJQ12913 1337 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 FAM187AA6NFU0 413 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 M0QZ92 97 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 GABRDO14764 452 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 LRRN2O75325 713 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 UBOX5O94941 541 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 PGK1P00558 417 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 TNNC2P02585 160 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 PAX3P23760 479 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 TBXAS1P24557 533 aaPredicted RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 CYP2C18P33260 490 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 ADH7P40394 386 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 TMPRSS15P98073 1019 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 RING1Q06587 406 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 ZC3H12AQ5D1E8 599 aaKnown RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 LMBRD2Q68DH5 695 aaPredicted RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 NOTUMQ6P988 496 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 CATSPER4Q7RTX7 472 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 RSPH3Q86UC2 560 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 MCATQ8IVS2 390 aaKnown RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 CD302Q8IX05 232 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 FAM71AQ8IYT1 594 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 DNAJB3Q8WWF6 145 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 PPP2R3CQ969Q6 453 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 RAD9AQ99638 391 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 WNT10AQ9GZT5 417 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 NSUN3Q9H649 340 aaKnown RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 ASB7Q9H672 318 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 FRRS1LQ9P0K9 344 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 HIF3AQ9Y2N7 669 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 RWDD3Q9Y3V2 267 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 PDCD11Q14690 1871 aaKnown RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 A0A087X0T9 212 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 A0A0U1RQJ8 604 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 FOXN3O00409 490 aaPredicted RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 NPTXRO95502 500 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 FAM228BP0C875 321 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 CRYBB1P53674 252 aaPredicted RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 NAB2Q15742 525 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 ZNF569Q5MCW4 686 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 PSAPL1Q6NUJ1 521 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 SLC27A1Q6PCB7 646 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 ASCL5Q7RTU5 278 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 ZBTB46Q86UZ6 589 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 PASD1Q8IV76 773 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 CNTD1Q8N815 330 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 GSTCDQ8NEC7 633 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 ATRIPQ8WXE1 791 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
TPM3-213ENST00000368545 CPB2Q96IY4 423 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 WDR24Q96S15 920 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 MTMR12Q9C0I1 747 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 KLF15Q9UIH9 416 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 INTUQ9ULD6 942 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 COL6A3P12111 3177 aa9.29□□□□□ -0.92
TPM3-213ENST00000368545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 CTAGE9A4FU28 777 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 BTNL10A8MVZ5 291 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 RGS13O14921 159 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 OPA1O60313 960 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 BRINP1O60477 761 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 VNN1O95497 513 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 ASGR1P07306 291 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 JMJD7P0C870 316 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 STAG3L1P0CL83 205 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 PNMA6AP0CW24 399 aaPredicted RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 CXCL8P10145 99 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 PDE6CP51160 858 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 NOP14P78316 857 aaKnown RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 TMEM62Q0P6H9 643 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 TUBB2AQ13885 445 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 MLC1Q15049 377 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 ALKBH5Q6P6C2 394 aaKnown RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 CXCL17Q6UXB2 119 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 RPAINQ86UA6 219 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 SPATS2Q86XZ4 545 aaKnown RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 TCEAL8Q8IYN2 117 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 RNF10Q8N5U6 811 aaKnown RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 MYRIPQ8NFW9 859 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 TRIM58Q8NG06 486 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 OR5B17Q8NGF7 314 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms