RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 FOXO6A8MYZ6 492 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 RIPK2O43353 540 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 PROSCO94903 275 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 GAS8O95995 478 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 PFKMP08237 780 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 RALAP11233 206 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 TFE3P19532 575 aaPredicted RBP11.12□□□□□ -0.63
TPM3-212ENST00000368533 MDH1BQ5I0G3 518 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 KIAA0319Q5VV43 1072 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 PLEKHA7Q6IQ23 1121 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 ZNF365Q70YC5 407 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 XYLT1Q86Y38 959 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 ZNF280BQ86YH2 543 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 ANKS4BQ8N8V4 417 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
TPM3-212ENST00000368533 CD101Q93033 1021 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 SENP8Q96LD8 212 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 PWWP2AQ96N64 755 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 MRPL47Q9HD33 250 aaKnown RBP11.12□□□□□ -0.63
TPM3-212ENST00000368533 SAMD15Q9P1V8 674 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 R3HDM2Q9Y2K5 976 aaKnown RBP11.12□□□□□ -0.63
TPM3-212ENST00000368533 TTC3P53804 2025 aa11.12□□□□□ -0.63
TPM3-212ENST00000368533 NT5C1B-RDH14C9J2C7 533 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 FESP07332 822 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 NUDT17P0C025 328 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 VDRP11473 427 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 ATF2P15336 505 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 KYNUQ16719 465 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 LRRC34Q8IZ02 419 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 NETO2Q8NC67 525 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 DIS3LQ8TF46 1054 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 TLCD1Q96CP7 247 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 PPP1R10Q96QC0 940 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 TMEM209Q96SK2 561 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 TXLNGYQ9BZA5 131 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 STMN4Q9H169 189 aaPredicted RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 ANAPC5Q9UJX4 755 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 LRRD1A4D1F6 860 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 CD4P01730 458 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 CALB1P05937 261 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 CD48P09326 243 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 OR4Q2P0C623 313 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 RARGP13631 454 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 RNF220Q5VTB9 566 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 TRNP1Q6NT89 227 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 TAOK1Q7L7X3 1001 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 TEKT4Q8WW24 435 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 RUNDC3BQ96NL0 473 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 CDC42EP4Q9H3Q1 356 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 HESX1Q9UBX0 185 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 TMEM191CA6NGB0 347 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 GABBR2O75899 941 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 KRT1P04264 644 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 PAEPP09466 180 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 NDUFV1P49821 464 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 TRIM71Q2Q1W2 868 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 TIGD5Q53EQ6 642 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 ERMARDQ5T6L9 678 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 DBF4BQ8NFT6 615 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 ARHGEF2Q92974 986 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 FAM149B1Q96BN6 582 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
TPM3-212ENST00000368533 PGM2Q96G03 612 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 ZNF560Q96MR9 790 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 KCNK16Q96T55 309 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 SYT15Q9BQS2 421 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 FAM129AQ9BZQ8 928 aa11.11□□□□□ -0.63
TPM3-212ENST00000368533 MYBPHLA2RUH7 354 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 C5orf60A6NFR6 353 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 A6NHS1 94 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 AHCYL1O43865 530 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 AGTP01019 485 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 KCNE1P15382 129 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 IL1R2P27930 398 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 CHKAP35790 457 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 ITGA8P53708 1063 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 MAP3K7CLP57077 242 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 INCA1Q0VD86 236 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 PTK7Q13308 1070 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 CNGA2Q16280 664 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 HP1BP3Q5SSJ5 553 aaPredicted RBP11.1□□□□□ -0.63
TPM3-212ENST00000368533 CAPN12Q6ZSI9 719 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 GDAP1Q8TB36 358 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 LINC01599Q8WXQ3 324 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 ART4Q93070 314 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 TRIM11Q96F44 468 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 PAIP2Q9BPZ3 127 aaKnown RBP11.1□□□□□ -0.63
TPM3-212ENST00000368533 AVENQ9NQS1 362 aaPredicted RBP11.1□□□□□ -0.63
TPM3-212ENST00000368533 NKX1-2Q9UD57 310 aaPredicted RBP11.1□□□□□ -0.63
TPM3-212ENST00000368533 DNAJB4Q9UDY4 337 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms