RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 LRRC10BA6NIK2 292 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 BHMG1C9JSJ3 638 aaPredicted RBP10.36□□□□□ -0.75
CD48-202ENST00000368046 TULP2O00295 520 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 TRDMT1O14717 391 aaKnown RBP10.36□□□□□ -0.75
CD48-202ENST00000368046 CYP26A1O43174 497 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 LETM1O95202 739 aaPredicted RBP10.36□□□□□ -0.75
CD48-202ENST00000368046 NFATC1O95644 943 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 RALAP11233 206 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 KRT5P13647 590 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 ARSAP15289 507 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 GJA4P35212 333 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 GALK1P51570 392 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 NHLH1Q02575 133 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 KCNMA1Q12791 1236 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 ANGPT1Q15389 498 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 STX1AQ16623 288 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 ARHGAP44Q17R89 818 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 DGKKQ5KSL6 1271 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 CDKAL1Q5VV42 579 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 GJB7Q6PEY0 223 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 TXNDC11Q6PKC3 985 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 HTR3DQ70Z44 454 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 TADA2BQ86TJ2 420 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 SYNPOQ8N3V7 929 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 ZNF606Q8WXB4 792 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 ATOH1Q92858 354 aaPredicted RBP10.36□□□□□ -0.75
CD48-202ENST00000368046 EXOC4Q96A65 974 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 OTUB2Q96DC9 234 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 ZFRQ96KR1 1074 aaKnown RBP10.36□□□□□ -0.75
CD48-202ENST00000368046 HSFY1Q96LI6 401 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 ZSWIM1Q9BR11 485 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
CD48-202ENST00000368046 FANCLQ9NW38 375 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 CFAP97Q9P2B7 532 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 NAGPAQ9UK23 515 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 DNAJC12Q9UKB3 198 aa10.36□□□□□ -0.75
CD48-202ENST00000368046 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
CD48-202ENST00000368046 PES1O00541 588 aaKnown RBP10.35□□□□□ -0.75
CD48-202ENST00000368046 LAMTOR5O43504 91 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 MED7O43513 233 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 TPM2P07951 284 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 CDK11BP21127 795 aaKnown RBP10.35□□□□□ -0.75
CD48-202ENST00000368046 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
CD48-202ENST00000368046 GPD2P43304 727 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 YWHAGP61981 247 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD48-202ENST00000368046 COG7P83436 770 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 MYL5Q02045 173 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 APBA1Q02410 837 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 LRRC32Q14392 662 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 PON2Q15165 354 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 MEA1Q16626 185 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 DPY19L2P1Q6NXN4 242 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 PMF1Q6P1K2 205 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 RHBDF2Q6PJF5 856 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 C11orf57Q6ZUT1 292 aaPredicted RBP10.35□□□□□ -0.75
CD48-202ENST00000368046 SCML4Q8N228 414 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 SHC3Q92529 594 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 IER2Q9BTL4 223 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 ULBP1Q9BZM6 244 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
CD48-202ENST00000368046 VPS16Q9H269 839 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 SIX2Q9NPC8 291 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 CNGB3Q9NQW8 809 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 SPATA6Q9NWH7 488 aaPredicted RBP10.35□□□□□ -0.75
CD48-202ENST00000368046 NUDT5Q9UKK9 219 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 SH3BP1Q9Y3L3 701 aa10.35□□□□□ -0.75
CD48-202ENST00000368046 BECN2A8MW95 431 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 FOXN3O00409 490 aaPredicted RBP10.34□□□□□ -0.75
CD48-202ENST00000368046 CALCAP01258 141 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 LCP1P13796 627 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 PTMSP20962 102 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 DRD1P21728 446 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 GNA15P30679 374 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 PLA2G5P39877 138 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 USP8P40818 1118 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 RPL34P49207 117 aaKnown RBP10.34□□□□□ -0.75
CD48-202ENST00000368046 BPIFB4P59827 614 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 PTK2Q05397 1052 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 TYRO3Q06418 890 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 GOLGA8FQ08AF8 430 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 GOLGA8DPQ0D2H9 430 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 GRSF1Q12849 480 aaKnown RBP eCLIP10.34□□□□□ -0.75
CD48-202ENST00000368046 CCINQ13939 588 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 KRT31Q15323 416 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 DHCR24Q15392 516 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 C10orf120Q5SQS8 335 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 KLHDC7AQ5VTJ3 777 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 BTBD8Q5XKL5 378 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 MAML2Q8IZL2 1156 aaPredicted RBP10.34□□□□□ -0.75
CD48-202ENST00000368046 SIX6OS1Q8N1H7 587 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 ANKRD20A12PQ8NF67 263 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 STK32AQ8WU08 396 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 IRGQQ8WZA9 623 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 CD101Q93033 1021 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 SECISBP2LQ93073 1101 aaKnown RBP10.34□□□□□ -0.75
CD48-202ENST00000368046 CHFRQ96EP1 664 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 P2RY13Q9BPV8 354 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms