RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 KCTD13Q8WZ19 329 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 ZSWIM1Q9BR11 485 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 KLF16Q9BXK1 252 aaPredicted RBP25.14■■□□□ 1.62
PFDN2-201ENST00000368010 NDST4Q9H3R1 872 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 SAMSN1Q9NSI8 373 aaKnown RBP25.14■■□□□ 1.62
PFDN2-201ENST00000368010 NUDT5Q9UKK9 219 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 NFE2L3Q9Y4A8 694 aa25.14■■□□□ 1.62
PFDN2-201ENST00000368010 KCNJ18B7U540 433 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 ADH1CP00326 375 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 PON1P27169 355 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 CXCL12P48061 93 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 YWHAGP61981 247 aaKnown RBP eCLIP25.13■■□□□ 1.61
PFDN2-201ENST00000368010 ADIGQ0VDE8 80 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 KCNJ12Q14500 433 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 CCDC183Q5T5S1 534 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 NAIF1Q69YI7 327 aaPredicted RBP25.13■■□□□ 1.61
PFDN2-201ENST00000368010 PM20D1Q6GTS8 502 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 GJB7Q6PEY0 223 aa25.13■■□□□ 1.61
PFDN2-201ENST00000368010 SECISBP2LQ93073 1101 aaKnown RBP25.13■■□□□ 1.61
PFDN2-201ENST00000368010 LSM7Q9UK45 103 aaKnown RBP25.13■■□□□ 1.61
PFDN2-201ENST00000368010 MDM4O15151 490 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 CALCAP01258 141 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 EEF1GP26641 437 aaKnown RBP25.12■■□□□ 1.61
PFDN2-201ENST00000368010 ARHGAP44Q17R89 818 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 TSSK4Q6SA08 328 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 BBS7Q8IWZ6 715 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 SLC35F5Q8WV83 523 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 FBRSL1Q9HCM7 1045 aaKnown RBP25.12■■□□□ 1.61
PFDN2-201ENST00000368010 ANO10Q9NW15 660 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 R4GN57 208 aa25.12■■□□□ 1.61
PFDN2-201ENST00000368010 CACNA1IQ9P0X4 2223 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 EGFP01133 1207 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 APBA1Q02410 837 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 FBXO43Q4G163 708 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 MIIPQ5JXC2 388 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 RHBDF2Q6PJF5 856 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 HTR3DQ70Z44 454 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 RSRC2Q7L4I2 434 aaKnown RBP25.11■■□□□ 1.61
PFDN2-201ENST00000368010 MIB1Q86YT6 1006 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 NKD2Q969F2 451 aaPredicted RBP25.11■■□□□ 1.61
PFDN2-201ENST00000368010 WBP2Q969T9 261 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 CNGB3Q9NQW8 809 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 RASAL2Q9UJF2 1139 aa25.11■■□□□ 1.61
PFDN2-201ENST00000368010 PES1O00541 588 aaKnown RBP25.1■■□□□ 1.61
PFDN2-201ENST00000368010 ADH5P11766 374 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 OPRD1P41143 372 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 RGS7P49802 495 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 SATB1Q01826 763 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 STX1AQ16623 288 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 GAB4Q2WGN9 574 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 TCP11X2Q5H9J9 407 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 LY6G5CQ5SRR4 150 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 STRIP2Q9ULQ0 834 aa25.1■■□□□ 1.61
PFDN2-201ENST00000368010 MED7O43513 233 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 LETM1O95202 739 aaPredicted RBP25.09■■□□□ 1.61
PFDN2-201ENST00000368010 LCP1P13796 627 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 GNA15P30679 374 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 USP8P40818 1118 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 GAD2Q05329 585 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 EFEMP1Q12805 493 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 BTBD8Q5XKL5 378 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 SMYD5Q6GMV2 418 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 PMF1Q6P1K2 205 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 BHLHA9Q7RTU4 235 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 SCML4Q8N228 414 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 SHC3Q92529 594 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 NDRG1Q92597 394 aaKnown RBP25.09■■□□□ 1.61
PFDN2-201ENST00000368010 HSFY1Q96LI6 401 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 FAM126AQ9BYI3 521 aaPredicted RBP25.09■■□□□ 1.61
PFDN2-201ENST00000368010 SEMA4AQ9H3S1 761 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 SIX2Q9NPC8 291 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 ZSCAN32Q9NX65 697 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 PCDHGA2Q9Y5H1 932 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 PIEZO1Q92508 2521 aa25.09■■□□□ 1.61
PFDN2-201ENST00000368010 THAP12O43422 761 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 GREM1O60565 184 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 GFRA3O60609 400 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 ATG13O75143 517 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 RNF40O75150 1001 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 PAPSS2O95340 614 aaPredicted RBP25.08■■□□□ 1.61
PFDN2-201ENST00000368010 EIF2DP41214 584 aaKnown RBP25.08■■□□□ 1.61
PFDN2-201ENST00000368010 DAOAP59103 153 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 COG7P83436 770 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 MEA1Q16626 185 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 C11orf57Q6ZUT1 292 aaPredicted RBP25.08■■□□□ 1.61
PFDN2-201ENST00000368010 NELL1Q92832 810 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 SPHK2Q9NRA0 654 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 OLA1Q9NTK5 396 aaKnown RBP25.08■■□□□ 1.61
PFDN2-201ENST00000368010 MARCH2Q9P0N8 246 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 DNAJC12Q9UKB3 198 aa25.08■■□□□ 1.61
PFDN2-201ENST00000368010 BECN2A8MW95 431 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 STC2O76061 302 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 TDGF1P13385 188 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 NRLP54845 237 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 CDKAL1Q5VV42 579 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 BSPRYQ5W0U4 402 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 CCDC26Q8TAB7 109 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 RNF139Q8WU17 664 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 ZNF606Q8WXB4 792 aa25.07■■□□□ 1.6
PFDN2-201ENST00000368010 ATRIPQ8WXE1 791 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms