RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 ARAP3Q8WWN8 1544 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 TRIM13O60858 407 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 SHBGP04278 402 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 JAK1P23458 1154 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 RPA3P35244 121 aaPredicted RBP16.18■□□□□ 0.18
FBXO28-201ENST00000366862 ELK3P41970 407 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 SERPINH1P50454 418 aaKnown RBP16.18■□□□□ 0.18
FBXO28-201ENST00000366862 GEMP55040 296 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 NR1D2Q14995 579 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
FBXO28-201ENST00000366862 DGKDQ16760 1214 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 SPANXN2Q5MJ10 180 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 GRTP1Q5TC63 336 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 SH3RF1Q7Z6J0 888 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 CAMK1DQ8IU85 385 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
FBXO28-201ENST00000366862 MCRS1Q96EZ8 462 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 SLC30A1Q9Y6M5 507 aa16.18■□□□□ 0.18
FBXO28-201ENST00000366862 UBE2Q2LH0YL09 131 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 FAM20BO75063 409 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 TOP3AQ13472 1001 aaPredicted RBP16.17■□□□□ 0.18
FBXO28-201ENST00000366862 NAB1Q13506 487 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 SH3GLB1Q9Y371 365 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 RAD54BQ9Y620 910 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 TULP4Q9NRJ4 1543 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 ARIH2O95376 493 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 CCDC149Q6ZUS6 474 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 ANKS3Q6ZW76 656 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 NSMCE2Q96MF7 247 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 CLEC4MQ9H2X3 399 aaPredicted RBP16.17■□□□□ 0.18
FBXO28-201ENST00000366862 AK9Q5TCS8 1911 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 AVPR1AP37288 418 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 STAT5BP51692 787 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 BLMHQ13867 455 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 EXOC3L1Q86VI1 746 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 KCTD10Q9H3F6 313 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 C6orf203Q9P0P8 240 aaPredicted RBP16.17■□□□□ 0.18
FBXO28-201ENST00000366862 R3HDM2Q9Y2K5 976 aaKnown RBP16.17■□□□□ 0.18
FBXO28-201ENST00000366862 AAR2Q9Y312 384 aaKnown RBP16.17■□□□□ 0.18
FBXO28-201ENST00000366862 TRDMT1O14717 391 aaKnown RBP16.17■□□□□ 0.18
FBXO28-201ENST00000366862 KRT6BP04259 564 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 MMP13P45452 471 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 KRT6CP48668 564 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 CAPSLQ8WWF8 208 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 TMEM143Q96AN5 459 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
FBXO28-201ENST00000366862 CDC42BPAQ5VT25 1732 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 COL15A1P39059 1388 aa16.17■□□□□ 0.18
FBXO28-201ENST00000366862 VWA5AO00534 786 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 MED24O75448 989 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 PGK2P07205 417 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 RAD51Q06609 339 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
FBXO28-201ENST00000366862 EPS8Q12929 822 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 SLC5A9Q2M3M2 681 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 GOLGA7BQ2TAP0 167 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 RNF219Q5W0B1 726 aaPredicted RBP16.16■□□□□ 0.18
FBXO28-201ENST00000366862 FAM45BPQ6NSW5 357 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 UGT3A1Q6NUS8 523 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 SNX32Q86XE0 403 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 GPRC5DQ9NZD1 345 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 DDX3XO00571 662 aaKnown RBP eCLIP16.16■□□□□ 0.184e-7■□□□□ 10.5
FBXO28-201ENST00000366862 MYL4P12829 197 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 VAV1P15498 845 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 ALOX12P18054 663 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 TTLL4Q14679 1199 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 KCNV1Q6PIU1 500 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 EID3Q8N140 333 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 AFG1LQ8WV93 481 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 DNAJC18Q9H819 358 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 IARS2Q9NSE4 1012 aaKnown RBP16.16■□□□□ 0.18
FBXO28-201ENST00000366862 NMRK1Q9NWW6 199 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 SYNDIG1LA6NDD5 238 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 RPS6KA4O75676 772 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 PGM3O95394 542 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 CCT8P50990 548 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 CCNHP51946 323 aaPredicted RBP16.16■□□□□ 0.18
FBXO28-201ENST00000366862 MPP3Q13368 585 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 C1DQ13901 141 aaKnown RBP16.16■□□□□ 0.18
FBXO28-201ENST00000366862 DDR2Q16832 855 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 ACCSLQ4AC99 568 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 PDZK1Q5T2W1 519 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 RIPOR1Q6ZS17 1223 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 S100ZQ8WXG8 99 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 SIK3Q9Y2K2 1263 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
FBXO28-201ENST00000366862 RRM2P31350 389 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 TRIM71Q2Q1W2 868 aaKnown RBP16.16■□□□□ 0.18
FBXO28-201ENST00000366862 BNIPLQ7Z465 357 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 MCOLN2Q8IZK6 566 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 ETNPPLQ8TBG4 499 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 ACTL9Q8TC94 416 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 DCUN1D1Q96GG9 259 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 GINS4Q9BRT9 223 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 INTS13Q9NVM9 706 aa16.16■□□□□ 0.18
FBXO28-201ENST00000366862 FAM25AB3EWG3 89 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms