RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 GRTP1Q5TC63 336 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 POLNQ7Z5Q5 900 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 NUDT12Q9BQG2 462 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 GPR63Q9BZJ6 419 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 FAM95CA0A1B0GW59 222 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SAC3D1A6NKF1 404 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 GRIN3BO60391 1043 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 C6orf222P0C671 652 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 PSMC3P17980 439 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 CDH17Q12864 832 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 POLD3Q15054 466 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 CYP4A22Q5TCH4 519 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 HORMAD1Q86X24 394 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SYTL5Q8TDW5 730 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 FAM162AQ96A26 154 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 POLLQ9UGP5 575 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 GRAP2O75791 330 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ALDH1A3P47895 512 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 RARRES1P49788 294 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ACCSLQ4AC99 568 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ZCWPW2Q504Y3 356 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SYCP2LQ5T4T6 812 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ECSITQ9BQ95 431 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 TPBGLP0DKB5 382 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 CHRNA5P30532 468 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ENPEPQ07075 957 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 LRRC8DQ7L1W4 858 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 DAB1O75553 588 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 IFNA14P01570 189 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 HNRNPCP07910 306 aaKnown RBP eCLIP12.41□□□□□ -0.425e-6■■■□□ 16.4
CDC42BPA-203ENST00000366766 AKT1P31749 480 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SKIV2L2P42285 1042 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 CYTH1Q15438 398 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 TAF2Q6P1X5 1199 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 VTA1Q9NP79 307 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 KCNK4Q9NYG8 393 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 POLG2Q9UHN1 485 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 DTNAQ9Y4J8 743 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 CHADO15335 359 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 ERMARDQ5T6L9 678 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 MAP4K3Q8IVH8 894 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 CEP44Q9C0F1 390 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 MSLNQ13421 630 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 ACMSDQ8TDX5 336 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 SLC20A1Q8WUM9 679 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 DNALI1O14645 258 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 STAG3L1P0CL83 205 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 PGAM1P18669 254 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 CASP4P49662 377 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 MPP3Q13368 585 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 PGM5Q15124 567 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 CHSY1Q86X52 802 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 FAM172AQ8WUF8 416 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 ELP3Q9H9T3 547 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 VWA5AO00534 786 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 AP1G2O75843 785 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 DUSP9Q99956 384 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 MAPRE3Q9UPY8 281 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 NID2Q14112 1375 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 MRC1P22897 1456 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 SERPINB3P29508 390 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 SHMT1P34896 483 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 TGFB2P61812 414 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 PURAQ00577 322 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 CHRNB3Q05901 458 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 EIF2B5Q13144 721 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 HIST2H2ACQ16777 129 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 HIST2H2AA3Q6FI13 130 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 FBXO47Q5MNV8 452 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 ASTN2O75129 1339 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 KRT87PA6NCN2 255 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 NUDT17P0C025 328 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 RRP1BQ14684 758 aaKnown RBP12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 SPATA20Q8TB22 786 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 SIK3Q9Y2K2 1263 aa12.4□□□□□ -0.42
CDC42BPA-203ENST00000366766 M0QYT0 321 aa12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 CXCL11O14625 94 aa12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 STX7O15400 261 aaKnown RBP12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 IL31Q6EBC2 164 aa12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 MDM1Q8TC05 714 aa12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 TCF7L2Q9NQB0 619 aa12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 GAKO14976 1311 aa12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.43
CDC42BPA-203ENST00000366766 ACKR2O00590 384 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 AGR3Q8TD06 166 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 INTS13Q9NVM9 706 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 POLIQ9UNA4 740 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 NUP93Q8N1F7 819 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 KIF2BQ8N4N8 673 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 STARD8Q92502 1023 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms