RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FAM124BQ9H5Z6 455 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 CHORDC1Q9UHD1 332 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 LGALS13Q9UHV8 139 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZNF711Q9Y462 761 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 ASTN2O75129 1339 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 TMED10P49755 219 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 RGS7P49802 495 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 MTA1Q13330 715 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 GRTP1Q5TC63 336 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 DEFB107AQ8IZN7 70 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 GALNT4Q8N4A0 578 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SYTL5Q8TDW5 730 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SNX19Q92543 992 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 TJP2Q9UDY2 1190 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 UBQLN1Q9UMX0 589 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 MFSD7Q6UXD7 560 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 GPRC5CQ9NQ84 441 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 DNAJC16Q9Y2G8 782 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 ACOT9Q9Y305 439 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 DNAJC6O75061 913 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 TRPC1P48995 793 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 NSUN2Q08J23 767 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 DENND1BQ6P3S1 775 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 MAF1Q9H063 256 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 ASB7Q9H672 318 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 DPP3Q9NY33 737 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM53CQ9NYF3 392 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 SIGLEC16A6NMB1 481 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 ADAM28Q9UKQ2 775 aa12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-202ENST00000366764 MTA2O94776 668 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 ATP6V1B1P15313 513 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 BBS12Q6ZW61 710 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLFN11Q7Z7L1 901 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 ALG3Q92685 438 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TLCD1Q96CP7 247 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 ADAM33Q9BZ11 813 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 CCDC90BQ9GZT6 254 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 FETUBQ9UGM5 382 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 PRPF4O43172 522 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 WASHC5Q12768 1159 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SPANXN3Q5MJ09 141 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SAMD4BQ5PRF9 694 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 WNK4Q96J92 1243 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 MPP6Q9NZW5 540 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 DNPEPQ9ULA0 475 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 LOC100653049A0A140TA62 436 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZNF839A8K0R7 811 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 NDUFS3O75489 264 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 KRT34O76011 436 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 NAA20P61599 178 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SYCP2LQ5T4T6 812 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 CLEC4FQ8N1N0 589 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TBC1D10AQ9BXI6 508 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 VANGL2Q9ULK5 521 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TIGD7Q6NT04 549 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 PLD3Q8IV08 490 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 VAT1Q99536 393 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 AP4E1Q9UPM8 1137 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLIT2O94813 1529 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 VPS4BO75351 444 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC1A6P48664 564 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 ARHGEF6Q15052 776 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM172AQ8WUF8 416 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 USP13Q92995 863 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TRIM45Q9H8W5 580 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 C8orf4Q9NR00 106 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM49BQ9NUQ9 324 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TRIM13O60858 407 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SERPINB1P30740 379 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 STRA8Q7Z7C7 330 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TRHDEQ9UKU6 1024 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 LIASO43766 372 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SOAT2O75908 522 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 LYPLA2O95372 231 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SHBGP04278 402 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 JAM2P57087 298 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 Q3C1V9 767 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 C6orf10Q5SRN2 563 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TRABD2AQ86V40 505 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 PIWIL2Q8TC59 973 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SIK2Q9H0K1 926 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 CHCHD3Q9NX63 227 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 C5P01031 1676 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 SAC3D1A6NKF1 404 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 TAF6P49848 677 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 GEMP55040 296 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 MPP3Q13368 585 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 GDPD5Q8WTR4 605 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms