RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 GLRA2P23416 452 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 SOAT1P35610 550 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 SNX5Q9Y5X3 404 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 VPS26AO75436 327 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 ACADMP11310 421 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 ITGALP20701 1170 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 PLD1Q13393 1074 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 ST13P4Q8IZP2 240 aaPredicted RBP19.18■□□□□ 0.66
CLIP2-202ENST00000361545 ACTL9Q8TC94 416 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 XPO6Q96QU8 1125 aaKnown RBP19.18■□□□□ 0.66
CLIP2-202ENST00000361545 RNF112Q9ULX5 631 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 MYO1CO00159 1063 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 DGKIO75912 1065 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 GLRBP48167 497 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 TUBP50607 506 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 SFSWAPQ12872 951 aaKnown RBP19.18■□□□□ 0.66
CLIP2-202ENST00000361545 ILDR2Q71H61 639 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 DEFB106AQ8N104 65 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 CDK5RAP1Q96SZ6 601 aaKnown RBP19.18■□□□□ 0.66
CLIP2-202ENST00000361545 ELOVL4Q9GZR5 314 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 CLPBQ9H078 707 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 OSGEPL1Q9H4B0 414 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 VIPAS39Q9H9C1 493 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 RAMP2O60895 175 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 FKTNO75072 461 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 USP17L7P0C7H9 530 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 EIF4BP23588 611 aaKnown RBP19.18■□□□□ 0.66
CLIP2-202ENST00000361545 MARC1Q5VT66 337 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 LPCAT1Q8NF37 534 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 KLRG1Q96E93 195 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 ATP13A1Q9HD20 1204 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 GCNT1Q02742 428 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 CRY2Q49AN0 593 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 LAYNQ6UX15 382 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 C1orf186Q6ZWK4 172 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 KIRREL3Q8IZU9 778 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 ZNF513Q8N8E2 541 aaPredicted RBP19.17■□□□□ 0.66
CLIP2-202ENST00000361545 FAM111AQ96PZ2 611 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 LRRC40Q9H9A6 602 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 PNMA8BQ9ULN7 279 aaPredicted RBP19.17■□□□□ 0.66
CLIP2-202ENST00000361545 ALDH1A2O94788 518 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 HOXC6P09630 235 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 MCL1Q07820 350 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 AGAP9Q5VTM2 703 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 C11orf63Q6NUN7 778 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 APBA2Q99767 749 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 NEUROG2Q9H2A3 272 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 MANSC1Q9H8J5 431 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 SELENONQ9NZV5 590 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 UMODL1Q5DID0 1318 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 CBWD6Q4V339 395 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 CBWD3Q5JTY5 395 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 CBWD5Q5RIA9 395 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 COLGALT1Q8NBJ5 622 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 WNK4Q96J92 1243 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 DUSP9Q99956 384 aaKnown RBP19.17■□□□□ 0.66
CLIP2-202ENST00000361545 KCNMB3Q9NPA1 279 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 RIC8BQ9NVN3 520 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 UBIAD1Q9Y5Z9 338 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 FKBP9O95302 570 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 OCM2P0CE71 109 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 OCMP0CE72 109 aaPredicted RBP19.17■□□□□ 0.66
CLIP2-202ENST00000361545 TCN1P20061 433 aaPredicted RBP19.17■□□□□ 0.66
CLIP2-202ENST00000361545 HSD17B3P37058 310 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 SHROOM1Q2M3G4 852 aaPredicted RBP19.17■□□□□ 0.66
CLIP2-202ENST00000361545 AGBL2Q5U5Z8 902 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 RETSATQ6NUM9 610 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 FKBP9P1Q75LS8 142 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 NT5DC3Q86UY8 548 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 HAS1Q92839 578 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 ADGRE3Q9BY15 652 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 HPS4Q9NQG7 708 aa19.17■□□□□ 0.66
CLIP2-202ENST00000361545 LOC100653049A0A140TA62 436 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 ATP9AO75110 1047 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 KRT34O76011 436 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 ARIH2O95376 493 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 CRTAMO95727 393 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 AMPD2Q01433 879 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 PHACTR4Q8IZ21 702 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 CNPY4Q8N129 248 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 TMEM161AQ9NX61 479 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 THG1LQ9NWX6 298 aaKnown RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 FAM32AQ9Y421 112 aaKnown RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 XYLBO75191 536 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 GJB6O95452 261 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 RAP1GDS1P52306 607 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 MRPS6P82932 125 aaKnown RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 PTAR1Q7Z6K3 402 aaPredicted RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 LGI2Q8N0V4 545 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 EPN3Q9H201 632 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 RUVBL2Q9Y230 463 aaKnown RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 TUFMP49411 452 aaKnown RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 WSCD1Q658N2 575 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 RBM43Q6ZSC3 357 aaKnown RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 NT5DC4Q86YG4 428 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 RIBC1Q8N443 379 aaPredicted RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 GLIS3Q8NEA6 775 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 CCT8L2Q96SF2 557 aa19.16■□□□□ 0.66
CLIP2-202ENST00000361545 STX18Q9P2W9 335 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms