RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 MAIP1Q8WWC4 291 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 ZMYND8Q9ULU4 1186 aaPredicted RBP24.2■■□□□ 1.46
SDF4-202ENST00000360001 STAP1Q9ULZ2 295 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 SLC27A5Q9Y2P5 690 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 hCG_1818297A0A087WSY0 165 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 CD48P09326 243 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 H2AFXP16104 143 aaPredicted RBP24.19■■□□□ 1.46
SDF4-202ENST00000360001 OR1D2P34982 312 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 GLUD2P49448 558 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 SLC7A5Q01650 507 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 ADCY2Q08462 1091 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 PPP2R5EQ16537 467 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 TFDP3Q5H9I0 405 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 CLSTN3Q9BQT9 956 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.19■■□□□ 1.46
SDF4-202ENST00000360001 INSL6Q9Y581 213 aa24.19■■□□□ 1.46
SDF4-202ENST00000360001 CAPN9O14815 690 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 SOAT2O75908 522 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 ARSEP51690 589 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 BSPRYQ5W0U4 402 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 WDR93Q6P2C0 686 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 NUP93Q8N1F7 819 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 FIBCD1Q8N539 461 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 C12orf50Q8NA57 414 aaPredicted RBP24.18■■□□□ 1.46
SDF4-202ENST00000360001 KCTD6Q8NC69 237 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 STKLD1Q8NE28 680 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 ZBED2Q9BTP6 218 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 HTATIP2Q9BUP3 242 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 SNRNP25Q9BV90 132 aaKnown RBP24.18■■□□□ 1.46
SDF4-202ENST00000360001 AMACRQ9UHK6 382 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 HAPLN1P10915 354 aaPredicted RBP24.18■■□□□ 1.46
SDF4-202ENST00000360001 NCAM1P13591 858 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 PPM1AP35813 382 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 VSNL1P62760 191 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 IFRD2Q12894 506 aaPredicted RBP24.18■■□□□ 1.46
SDF4-202ENST00000360001 DUSP4Q13115 394 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 KAZNQ674X7 775 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 FBXO38Q6PIJ6 1188 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 HERC6Q8IVU3 1022 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 MAGOHBQ96A72 148 aaKnown RBP24.18■■□□□ 1.46
SDF4-202ENST00000360001 AAASQ9NRG9 546 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 R3HDM2Q9Y2K5 976 aaKnown RBP24.18■■□□□ 1.46
SDF4-202ENST00000360001 SLC4A7Q9Y6M7 1214 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 MYO16Q9Y6X6 1858 aa24.18■■□□□ 1.46
SDF4-202ENST00000360001 M0QYT0 321 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 MDM4O15151 490 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 CHRNA3P32297 505 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 MGAT5BQ3V5L5 792 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 TTC27Q6P3X3 843 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 EDEM1Q92611 657 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 CLP1Q92989 425 aaKnown RBP24.17■■□□□ 1.46
SDF4-202ENST00000360001 SEPT5Q99719 369 aaPredicted RBP24.17■■□□□ 1.46
SDF4-202ENST00000360001 GPATCH2LQ9NWQ4 482 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 STIM2Q9P246 746 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 PCDHB12Q9Y5F1 795 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 PLXNA3P51805 1871 aa24.17■■□□□ 1.46
SDF4-202ENST00000360001 ZMYND10O75800 440 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 RDXP35241 583 aaKnown RBP24.16■■□□□ 1.46
SDF4-202ENST00000360001 ZC3H12AQ5D1E8 599 aaKnown RBP24.16■■□□□ 1.46
SDF4-202ENST00000360001 BEND5Q7L4P6 421 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 C1orf54Q8WWF1 131 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 SLC9A7Q96T83 725 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 HINFPQ9BQA5 517 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 PLEKHA4Q9H4M7 779 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 LRRC19Q9H756 370 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.16■■□□□ 1.462e-6■■■■□ 23.1
SDF4-202ENST00000360001 RRN3Q9NYV6 651 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 IL37Q9NZH6 218 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 SCML2Q9UQR0 700 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 EFR3BQ9Y2G0 817 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 HEXIM1O94992 359 aaKnown RBP24.16■■□□□ 1.46
SDF4-202ENST00000360001 TJP3O95049 919 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 TUBBP07437 444 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 PGFP49763 221 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 CDH6P55285 790 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 YWHAGP61981 247 aaKnown RBP eCLIP24.16■■□□□ 1.46
SDF4-202ENST00000360001 USP46P62068 366 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 CA9Q16790 459 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 ERMARDQ5T6L9 678 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 SCD5Q86SK9 330 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 FAM131BQ86XD5 332 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 VPS52Q8N1B4 723 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 CCDC185Q8N715 623 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 SLC7A14Q8TBB6 771 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 SP7Q8TDD2 431 aaPredicted RBP24.16■■□□□ 1.46
SDF4-202ENST00000360001 GPR152Q8TDT2 470 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 PGAP3Q96FM1 320 aaPredicted RBP24.16■■□□□ 1.46
SDF4-202ENST00000360001 SPATA17Q96L03 361 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 RAD9AQ99638 391 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 PIGVQ9NUD9 493 aa24.16■■□□□ 1.46
SDF4-202ENST00000360001 MAATS1Q7Z4T9 603 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 CCDC26Q8TAB7 109 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 ADAM32Q8TC27 787 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 PHOSPHO2Q8TCD6 241 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 ATG4AQ8WYN0 398 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 TRIM62Q9BVG3 475 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 PCYOX1Q9UHG3 505 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 GREB1Q4ZG55 1949 aa24.15■■□□□ 1.46
SDF4-202ENST00000360001 SYNJ2BP-COX16A0A087WUM0 186 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 TTI1O43156 1089 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms