RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PCDH19Q8TAB3 1148 aa8.93□□□□□ -0.98
RFX3-202ENST00000358730 TTC8Q8TAM2 541 aa8.93□□□□□ -0.98
RFX3-202ENST00000358730 CCDC110Q8TBZ0 833 aa8.93□□□□□ -0.98
RFX3-202ENST00000358730 RTP4Q96DX8 246 aa8.93□□□□□ -0.98
RFX3-202ENST00000358730 FRMD8Q9BZ67 464 aaPredicted RBP8.93□□□□□ -0.98
RFX3-202ENST00000358730 DENND2DQ9H6A0 471 aaPredicted RBP8.93□□□□□ -0.98
RFX3-202ENST00000358730 FAM49BQ9NUQ9 324 aa8.93□□□□□ -0.98
RFX3-202ENST00000358730 ETNK2Q9NVF9 386 aa8.93□□□□□ -0.98
RFX3-202ENST00000358730 DPP3Q9NY33 737 aa8.93□□□□□ -0.98
RFX3-202ENST00000358730 SCN1AP35498 2009 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CXorf49A8MYA2 514 aaPredicted RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 ADM5C9JUS6 153 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 ENTPD5O75356 428 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 ECM2O94769 699 aaPredicted RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 TPBGLP0DKB5 382 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 DESP17661 470 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 RBP5P82980 135 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CA9Q16790 459 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 BOLA3Q53S33 107 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 WASHC2DQ5SRD0 308 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 PPP1R26Q5T8A7 1209 aaPredicted RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 PMF1Q6P1K2 205 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 SH2D5Q6ZV89 423 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 BZW1Q7L1Q6 419 aaKnown RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 NLRP7Q8WX94 980 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 SKA1Q96BD8 255 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 MIEF2Q96C03 454 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 KIF12Q96FN5 646 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 PRR11Q96HE9 360 aaPredicted RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 PNPLA8Q9NP80 782 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 ARL8BQ9NVJ2 186 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 MTO1Q9Y2Z2 717 aaKnown RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 C2CD2Q9Y426 696 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 DNAJC25-GNG10A0A024R161 153 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 DPYSL4O14531 572 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CCDC22O60826 627 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 TGDSO95455 350 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 C1QAP02745 245 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 LGALS2P05162 132 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 SNRPAP09012 282 aaKnown RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 DLDP09622 509 aaKnown RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 MYL2P10916 166 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 GNAZP19086 355 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CDC25CP30307 473 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CCNG1P51959 295 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 BMPR2Q13873 1038 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 Q3C1V9 767 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 SLC9A4Q6AI14 798 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CAND1Q86VP6 1230 aaKnown RBP8.92□□□□□ -0.98
RFX3-202ENST00000358730 ACAP3Q96P50 834 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 MECRQ9BV79 373 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 TLE6Q9H808 572 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 KCNK13Q9HB14 408 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CNTN3Q9P232 1028 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 KIAA1257Q9ULG3 409 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 MAD1L1Q9Y6D9 718 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 PLXNA1Q9UIW2 1896 aa8.92□□□□□ -0.98
RFX3-202ENST00000358730 CCDC195A0A1B0GUA6 201 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 BCLAF3A2AJT9 711 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 I3L4J1 428 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 UGT1A9O60656 530 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ZNF286BP0CG31 522 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 STILQ15468 1287 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ZNF484Q5JVG2 852 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 RFWD3Q6PCD5 774 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TTC7BQ86TV6 843 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ACOT1Q86TX2 421 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TTC30AQ86WT1 665 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 GPC2Q8N158 579 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 VPS52Q8N1B4 723 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TTC39CQ8N584 583 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 FBXO41Q8TF61 875 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TEKT4Q8WW24 435 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 PTCD3Q96EY7 689 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 CLMNQ96JQ2 1002 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TBCBQ99426 244 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ZNF670Q9BS34 389 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 CADM1Q9BY67 442 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 SLC13A1Q9BZW2 595 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 UGT1A7Q9HAW7 530 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 UGT1A10Q9HAW8 530 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 UGT1A8Q9HAW9 530 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 BATF3Q9NR55 127 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 RGS17Q9UGC6 210 aaPredicted RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 ZNF180Q9UJW8 692 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 SLC15A5A6NIM6 579 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 GYG2O15488 501 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TSPAN1O60635 241 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 DNAJC6O75061 913 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 APOEP02649 317 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 CSH1P0DML2 217 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 CSH2P0DML3 217 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 PRKCHP24723 683 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 CYP2F1P24903 491 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 HDAC4P56524 1084 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 POU5F1BQ06416 359 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 KYAT1Q16773 422 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 LGSNQ5TDP6 509 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TRIM68Q6AZZ1 485 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms