RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ADPGKQ9BRR6 497 aa18.39■□□□□ 0.53
RTN4-204ENST00000357732 FAM96AQ9H5X1 160 aa18.39■□□□□ 0.53
RTN4-204ENST00000357732 VRTNQ9H8Y1 702 aa18.39■□□□□ 0.53
RTN4-204ENST00000357732 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.39■□□□□ 0.53
RTN4-204ENST00000357732 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■□□□□ 10
RTN4-204ENST00000357732 LCTP09848 1927 aa18.39■□□□□ 0.53
RTN4-204ENST00000357732 TTLL13PA6NNM8 815 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 FKBP6O75344 327 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 ATICP31939 592 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 MRPS5P82675 430 aaKnown RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 BOLA3Q53S33 107 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 AAGABQ6PD74 315 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 CDHR3Q6ZTQ4 885 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 ALYREFQ86V81 257 aaKnown RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 ZC3H18Q86VM9 953 aaKnown RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 MYLK4Q86YV6 388 aaPredicted RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 NUDCD3Q8IVD9 361 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 GALNT15Q8N3T1 639 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 TTC39CQ8N584 583 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 SPDYE1Q8NFV5 336 aaPredicted RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 JDP2Q8WYK2 163 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 FAM161BQ96MY7 647 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 WRNIP1Q96S55 665 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 TBCBQ99426 244 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 PTPRHQ9HD43 1115 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 PAPOLBQ9NRJ5 636 aaKnown RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 TJP2Q9UDY2 1190 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 ZNF112Q9UJU3 913 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 H3BRJ5 948 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 FARP2O94887 1054 aaPredicted RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 VDRP11473 427 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 PRPF39Q86UA1 669 aaKnown RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 SESTD1Q86VW0 696 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 CFAP36Q96G28 342 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 TMEM176AQ96HP8 235 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 CAMKK2Q96RR4 588 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 PCYT2Q99447 389 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 CCDC106Q9BWC9 280 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 THAP1Q9NVV9 213 aa18.38■□□□□ 0.53
RTN4-204ENST00000357732 PPARGC1AQ9UBK2 798 aaKnown RBP18.38■□□□□ 0.53
RTN4-204ENST00000357732 SPDYE5A6NIY4 337 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 E5RJQ4 531 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 MICAL2O94851 1124 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 BPGMP07738 259 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 P4HA1P13674 534 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 AOC1P19801 751 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 MAGEA3P43357 314 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 TUBP50607 506 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 LAMTOR4Q0VGL1 99 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 TMCO4Q5TGY1 634 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 ZNF772Q68DY9 489 aaPredicted RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 CYP4V2Q6ZWL3 525 aaPredicted RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 ARID3BQ8IVW6 561 aaPredicted RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 TAB3Q8N5C8 712 aaPredicted RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 RBM15BQ8NDT2 890 aaKnown RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 GSDMBQ8TAX9 411 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 PEBP4Q96S96 227 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 GCOM2Q9BZD3 368 aaPredicted RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 PICK1Q9NRD5 415 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 KRT82Q9NSB4 513 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 HOXC10Q9NYD6 342 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 NXF1Q9UBU9 619 aaKnown RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 KIAA1257Q9ULG3 409 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 FAM159BA6NKW6 160 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 C2CD4BA6NLJ0 364 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 ENO4A6NNW6 628 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 ACKR2O00590 384 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 CILPO75339 1184 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 TGFB3P10600 412 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 TPSB2P20231 275 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 UBA1P22314 1058 aaKnown RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 GPD2P43304 727 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 RBBP5Q15291 538 aaKnown RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 TPSAB1Q15661 275 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 CHI3L2Q15782 390 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 FAM102AQ5T9C2 384 aaPredicted RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 CAND1Q86VP6 1230 aaKnown RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 MICALL2Q8IY33 904 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 PLD5Q8N7P1 536 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 CEP120Q8N960 986 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 ACMSDQ8TDX5 336 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 ACAP3Q96P50 834 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 ETNK2Q9NVF9 386 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 ARMCX1Q9P291 453 aa18.37■□□□□ 0.53
RTN4-204ENST00000357732 HBS1LQ9Y450 684 aaKnown RBP18.37■□□□□ 0.53
RTN4-204ENST00000357732 ANK1P16157 1881 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 IGKV6-21A0A0C4DH24 114 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 DPYSL4O14531 572 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 APOL1O14791 398 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 KCNN4O15554 427 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 ZBED1O96006 694 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 ANPEPP15144 967 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 DESP17661 470 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 DSG1Q02413 1049 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 TAF5Q15542 800 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 SLC9A4Q6AI14 798 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 TREML1Q86YW5 311 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms