RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 PTPRBP23467 1997 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 IGHV1OR15-9A0A0B4J2B8 117 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 A0A1W2PQD8 194 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 CLDN5O00501 218 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 EIF3DO15371 548 aaKnown RBP eCLIP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 TGFB1I1O43294 461 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 OPHN1O60890 802 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF217O75362 1048 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 GJB3O75712 270 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 ATICP31939 592 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 RDXP35241 583 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 STAT6P42226 847 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 SNRPFP62306 86 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 RPL6Q02878 288 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 KDSRQ06136 332 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 GFPT1Q06210 699 aaPredicted RBP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 SLC14A1Q13336 389 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 CUL4AQ13619 759 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 PSMD6Q15008 389 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 SLC39A14Q15043 492 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 SNRNP35Q16560 246 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF423Q2M1K9 1284 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 WDR72Q3MJ13 1102 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 BTBD8Q5XKL5 378 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 CNNM4Q6P4Q7 775 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 STXBP4Q6ZWJ1 553 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 EPM2AIP1Q7L775 607 aaPredicted RBP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 TMEM25Q86YD3 366 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 MIB1Q86YT6 1006 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 SLC41A1Q8IVJ1 513 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 BBS7Q8IWZ6 715 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 PGBD3Q8N328 593 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 NAT16Q8N8M0 369 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 TERB1Q8NA31 727 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 SCAMP5Q8TAC9 235 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 NOC3LQ8WTT2 800 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 FBXO32Q969P5 355 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 WBP2Q969T9 261 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 KCNK16Q96T55 309 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 XYLT2Q9H1B5 865 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 TNMDQ9H2S6 317 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 KBTBD4Q9NVX7 518 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 CALCOCO1Q9P1Z2 691 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 LHX6Q9UPM6 363 aa9.1□□□□□ -0.95
COL4A3BP-202ENST00000357457 BPTFQ12830 3046 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 A8MXQ7 604 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 TRIM24O15164 1050 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 CFIP05156 583 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 SYPP08247 313 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 HOXB2P14652 356 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 TNNI1P19237 187 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 PDCP20941 246 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 ATXN3P54252 364 aaPredicted RBP9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 TNNC1P63316 161 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 CYP24A1Q07973 514 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 ACAP1Q15027 740 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 PROSER1Q86XN7 944 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 CHCHD4Q8N4Q1 142 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 MINDY1Q8N5J2 469 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 DEFB119Q8N690 84 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 RDH13Q8NBN7 331 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 IPO4Q8TEX9 1081 aaKnown RBP9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 HPS3Q969F9 1004 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 CGRRF1Q99675 332 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 GABRG3Q99928 467 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 GTPBP2Q9BX10 602 aaKnown RBP9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 TRIM9Q9C026 710 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 CCSER2Q9H7U1 834 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 FSCN3Q9NQT6 498 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 AGPAT3Q9NRZ7 376 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 MARK1Q9P0L2 795 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 SH3BP1Q9Y3L3 701 aa9.09□□□□□ -0.95
COL4A3BP-202ENST00000357457 ATXN2Q99700 1313 aaKnown RBP9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 IGSF10Q6WRI0 2623 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 GFRA2O00451 464 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 MAP3K7O43318 606 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 CACNG3O60359 315 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 CISD3P0C7P0 127 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 NDUFV2P19404 249 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 PGFP49763 221 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 SLC5A3P53794 718 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 CDH8P55286 799 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 MYL6P60660 151 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 CLDN10P78369 228 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 EHHADHQ08426 723 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 IFRD2Q12894 506 aaPredicted RBP9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 TRIP6Q15654 476 aaKnown RBP9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 ANO4Q32M45 955 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 C10orf76Q5T2E6 689 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 EGFLAMQ63HQ2 1017 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 FAM173BQ6P4H8 233 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 METTL3Q86U44 580 aaKnown RBP9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 C12orf56Q8IXR9 622 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
COL4A3BP-202ENST00000357457 CRYBG2Q8N1P7 616 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms