RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 HSP90AA5PQ58FG0 334 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 CC2D2BQ6DHV5 1058 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 FRMD7Q6ZUT3 714 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 RTKN2Q8IZC4 609 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 GALNT4Q8N4A0 578 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 RIN3Q8TB24 985 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 GMCL1Q96IK5 515 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 VCPIP1Q96JH7 1222 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 TIMMDC1Q9NPL8 285 aa19.59■□□□□ 0.73
PRPF39-201ENST00000355765 BTBD19C9JJ37 291 aa19.58■□□□□ 0.73
PRPF39-201ENST00000355765 DKC1O60832 514 aaKnown RBP eCLIP19.58■□□□□ 0.739e-9■■■■□ 19.9
PRPF39-201ENST00000355765 VIL1P09327 827 aaKnown RBP19.58■□□□□ 0.73
PRPF39-201ENST00000355765 MSX2P35548 267 aaPredicted RBP19.58■□□□□ 0.73
PRPF39-201ENST00000355765 ATXN3P54252 364 aaPredicted RBP19.58■□□□□ 0.73
PRPF39-201ENST00000355765 EIF3EP60228 445 aaKnown RBP19.58■□□□□ 0.73
PRPF39-201ENST00000355765 ZNF394Q53GI3 561 aa19.58■□□□□ 0.73
PRPF39-201ENST00000355765 TRIM72Q6ZMU5 477 aa19.58■□□□□ 0.73
PRPF39-201ENST00000355765 WDR75Q8IWA0 830 aaKnown RBP19.58■□□□□ 0.73
PRPF39-201ENST00000355765 GPD1LQ8N335 351 aa19.58■□□□□ 0.73
PRPF39-201ENST00000355765 TFB1MQ8WVM0 346 aaKnown RBP19.58■□□□□ 0.73
PRPF39-201ENST00000355765 KMT5AQ9NQR1 393 aa19.58■□□□□ 0.73
PRPF39-201ENST00000355765 KCNH7Q9NS40 1196 aa19.58■□□□□ 0.73
PRPF39-201ENST00000355765 PTPRJQ12913 1337 aa19.58■□□□□ 0.73
PRPF39-201ENST00000355765 ONECUT3O60422 494 aaPredicted RBP19.58■□□□□ 0.72
PRPF39-201ENST00000355765 GH2P01242 217 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 MMP8P22894 467 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 IL1R2P27930 398 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 QARSP47897 775 aaKnown RBP19.58■□□□□ 0.72
PRPF39-201ENST00000355765 CUL2Q13617 745 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 PDK1Q15118 436 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 DOK7Q18PE1 504 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 ABCB5Q2M3G0 1257 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 RC3H1Q5TC82 1133 aaKnown RBP19.58■□□□□ 0.72
PRPF39-201ENST00000355765 NPNTQ6UXI9 565 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 USP37Q86T82 979 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 RFX6Q8HWS3 928 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 PQLC1Q8N2U9 271 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 PHTF2Q8N3S3 785 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 CCDC33Q8N5R6 958 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 DIS3LQ8TF46 1054 aaKnown RBP19.58■□□□□ 0.72
PRPF39-201ENST00000355765 CSRNP1Q96S65 589 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 SIKE1Q9BRV8 207 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 DENRO43583 198 aaKnown RBP19.58■□□□□ 0.72
PRPF39-201ENST00000355765 ANGEL2Q5VTE6 544 aaKnown RBP19.58■□□□□ 0.72
PRPF39-201ENST00000355765 TATDN1Q6P1N9 297 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 KBTBD6Q86V97 674 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 FBXW8Q8N3Y1 598 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 ZFRQ96KR1 1074 aaKnown RBP19.58■□□□□ 0.72
PRPF39-201ENST00000355765 PNPOQ9NVS9 261 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 PCSK1NQ9UHG2 260 aa19.58■□□□□ 0.72
PRPF39-201ENST00000355765 CSH1P0DML2 217 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 CSH2P0DML3 217 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 RBP3P10745 1247 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 KCNA4P22459 653 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 ABCD1P33897 745 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 FASTKD1Q53R41 847 aaKnown RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 LRRC38Q5VT99 294 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 MAVSQ7Z434 540 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 RNF168Q8IYW5 571 aaPredicted RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 IL31RAQ8NI17 732 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 MXRA8Q9BRK3 442 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 ST6GALNAC4Q9H4F1 302 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 THAP1Q9NVV9 213 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 DDX56Q9NY93 547 aaKnown RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 PEX1O43933 1283 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 TNFAIP8O95379 198 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 C1QAP02745 245 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 VARSP26640 1264 aaKnown RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 ACOT2P49753 483 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 SNRPFP62306 86 aaKnown RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 DMP1Q13316 513 aaPredicted RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 PPP6R3Q5H9R7 873 aaPredicted RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 ZNF410Q86VK4 478 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 ZBTB8BQ8NAP8 495 aaPredicted RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 GMCL1P1Q8NEA9 526 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 PIWIL2Q8TC59 973 aaKnown RBP19.57■□□□□ 0.72
PRPF39-201ENST00000355765 ZNF606Q8WXB4 792 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 FAF2Q96CS3 445 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 FBXL18Q96ME1 805 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 Q9H521 79 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 HOMER2Q9NSB8 354 aa19.57■□□□□ 0.72
PRPF39-201ENST00000355765 ARHGAP10A1A4S6 786 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 ZC3H11AO75152 810 aaKnown RBP eCLIP19.56■□□□□ 0.726e-6■□□□□ 11.2
PRPF39-201ENST00000355765 KLHL2O95198 593 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 VNN1O95497 513 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 CD1EP15812 388 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 HDAC4P56524 1084 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 MRPS22P82650 360 aaKnown RBP19.56■□□□□ 0.72
PRPF39-201ENST00000355765 LPIN1Q14693 890 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 CYTH1Q15438 398 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 TAF5Q15542 800 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 PDPK2PQ6A1A2 396 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 SH3BP5LQ7L8J4 393 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 LRRN4Q8WUT4 740 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 ZC3H7BQ9UGR2 993 aaKnown RBP19.56■□□□□ 0.72
PRPF39-201ENST00000355765 ITGA11Q9UKX5 1188 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 SH3GLB1Q9Y371 365 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 ZNF536O15090 1300 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 ZNF189O75820 626 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms