RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 ALDH5A1P51649 535 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CLEC16AQ2KHT3 1053 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 EOGTQ5NDL2 527 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 METTL21CQ5VZV1 264 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CDK20Q8IZL9 346 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 LZTR1Q8N653 840 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 AGR3Q8TD06 166 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 KAT2BQ92831 832 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 MRPL48Q96GC5 212 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CRTAC1Q9NQ79 661 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CYP39A1Q9NYL5 469 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 USE1Q9NZ43 259 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 AHSPQ9NZD4 102 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 POLLQ9UGP5 575 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TCOF1Q13428 1488 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 RFX7Q2KHR2 1363 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 MGAT4DA6NG13 374 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ZSCAN5CA6NGD5 496 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 RASSF10A6NK89 507 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 IGF2BP3O00425 579 aaKnown RBP eCLIP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 EXTL3O43909 919 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CRTAMO95727 393 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TFPIP10646 304 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CPA3P15088 417 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CAPN2P17655 700 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CD52P31358 61 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CREB5Q02930 508 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 NFIAQ12857 509 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 PFKFB3Q16875 520 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SBK1Q52WX2 424 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 DGKKQ5KSL6 1271 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 FAM173BQ6P4H8 233 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 FOXR2Q6PJQ5 311 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 MPZL3Q6UWV2 235 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TRIM69Q86WT6 500 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 RIN3Q8TB24 985 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 IRF2BPLQ9H1B7 796 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ZDHHC4Q9NPG8 344 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 MTMR4Q9NYA4 1195 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 STARD13Q9Y3M8 1113 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 RBM7Q9Y580 266 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 A8MU76 341 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 GPR25O00155 361 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 KRT37O76014 449 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 LMNAP02545 664 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 INSRRP14616 1297 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 GPD1P21695 349 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 RAP1GAPP47736 663 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SGCBQ16585 318 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SEZ6Q53EL9 994 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 HGSNATQ68CP4 663 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ZNF564Q8TBZ8 553 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 PRCCQ92733 491 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TGS1Q96RS0 853 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TTC7AQ9ULT0 858 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ENTPD4Q9Y227 616 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SHROOM2Q13796 1616 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 WNT10BO00744 389 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ZBTB7BO15156 539 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SARSP49591 514 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 DUSP3P51452 185 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 GEMP55040 296 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 RHBDL3P58872 404 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ABCE1P61221 599 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SNRPD1P62314 119 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 KNOP1Q1ED39 458 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 PHLDB3Q6NSJ2 640 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CYP2U1Q7Z449 544 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 DENND1CQ8IV53 801 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ADGRG2Q8IZP9 1017 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ATP6V1C2Q8NEY4 427 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 MOSPD2Q8NHP6 518 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ELAC2Q9BQ52 826 aaKnown RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 NT5MQ9NPB1 228 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 POU2F3Q9UKI9 436 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 ZNF510Q9Y2H8 683 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CPS1P31327 1500 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TDP2O95551 362 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 FAM107AO95990 144 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SRGNP10124 158 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 PTPN2P17706 415 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 NOS3P29474 1203 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 NUP107P57740 925 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 PDK1Q15118 436 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 HECTD3Q5T447 861 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TMC5Q6UXY8 1006 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TFAP2DQ7Z6R9 452 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 CCDC51Q96ER9 411 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SMARCD1Q96GM5 515 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 FUBP3Q96I24 572 aaKnown RBP eCLIP5.3□□□□□ -1.56
CKAP5-202ENST00000354558 MCEEQ96PE7 176 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 SYT15Q9BQS2 421 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 TTLL2Q9BWV7 592 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 PRDM16Q9HAZ2 1276 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 VPS45Q9NRW7 570 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 GID8Q9NWU2 228 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 DEC1Q9P2X7 70 aa5.3□□□□□ -1.56
CKAP5-202ENST00000354558 VAV3Q9UKW4 847 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms