RNA–Protein interactions for RNA: ENST00000350592.7

C1orf43-201, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-201ENST00000350592 LIASO43766 372 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 SASH3O75995 380 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 GAS8O95995 478 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 FYNP06241 537 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 CSF2RAP15509 400 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 CYP2F1P24903 491 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 ECHS1P30084 290 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 MAGEA11P43364 429 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 SMARCB1Q12824 385 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 DPYSL3Q14195 570 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 KRT81Q14533 505 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 CASP8Q14790 479 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 VSTM1Q6UX27 236 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 BHLHA9Q7RTU4 235 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 PSTKQ8IV42 348 aaKnown RBP17.23■□□□□ 0.35
C1orf43-201ENST00000350592 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
C1orf43-201ENST00000350592 TRIM62Q9BVG3 475 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 DRG1Q9Y295 367 aaKnown RBP17.23■□□□□ 0.35
C1orf43-201ENST00000350592 PCDHB5Q9Y5E4 795 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 BRCA2P51587 3418 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 PTPRDP23468 1912 aa17.23■□□□□ 0.35
C1orf43-201ENST00000350592 TNFRSF10BO14763 440 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 CAPN9O14815 690 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 TRIM66O15016 1216 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 TBC1D4O60343 1298 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 CST8O60676 142 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 EFEMP2O95967 443 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
C1orf43-201ENST00000350592 TNNT3P45378 269 aaPredicted RBP17.22■□□□□ 0.35
C1orf43-201ENST00000350592 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
C1orf43-201ENST00000350592 OTUD1Q5VV17 481 aaPredicted RBP17.22■□□□□ 0.35
C1orf43-201ENST00000350592 ANKS3Q6ZW76 656 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 BEND5Q7L4P6 421 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 DDX42Q86XP3 938 aaKnown RBP eCLIP17.22■□□□□ 0.35
C1orf43-201ENST00000350592 RFX6Q8HWS3 928 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 C8orf48Q96LL4 319 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 TTPALQ9BTX7 342 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 CALN1Q9BXU9 219 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 MAK16Q9BXY0 300 aaKnown RBP17.22■□□□□ 0.35
C1orf43-201ENST00000350592 DPH5Q9H2P9 285 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 VIPAS39Q9H9C1 493 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 PCDH18Q9HCL0 1135 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 ABI2Q9NYB9 513 aaPredicted RBP17.22■□□□□ 0.35
C1orf43-201ENST00000350592 NAALADL1Q9UQQ1 740 aa17.22■□□□□ 0.35
C1orf43-201ENST00000350592 BAIAP3O94812 1187 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 PBX3P40426 434 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 ATXN1P54253 815 aaKnown RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 KRT17Q04695 432 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 PTK6Q13882 451 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 BYSLQ13895 437 aaKnown RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 TFDP2Q14188 446 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 PPP1R7Q15435 360 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 DPYSL2Q16555 572 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 SYPL2Q5VXT5 272 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 SND1Q7KZF4 910 aaKnown RBP eCLIP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 TMEM173Q86WV6 379 aaPredicted RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 BCL7CQ8WUZ0 217 aaPredicted RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 NKD2Q969F2 451 aaPredicted RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 PGAP3Q96FM1 320 aaPredicted RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 CCDC114Q96M63 670 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 ZNF670Q9BS34 389 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 FAM129AQ9BZQ8 928 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 TRIM31Q9BZY9 425 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 CALCOCO1Q9P1Z2 691 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 PATJQ8NI35 1801 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 CARNS1A5YM72 827 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 M0QYT0 321 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 NCAM1P13591 858 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 COL4A4P53420 1690 aaPredicted RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 SLC5A3P53794 718 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 WDR5P61964 334 aaKnown RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 GPR17Q13304 367 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 COL4A6Q14031 1691 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 ZC3H12AQ5D1E8 599 aaKnown RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 RTP2Q5QGT7 225 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 RNF168Q8IYW5 571 aaPredicted RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 FAF2Q96CS3 445 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 B3GALT6Q96L58 329 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 RNF157Q96PX1 679 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
C1orf43-201ENST00000350592 GPATCH2LQ9NWQ4 482 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 FAM53CQ9NYF3 392 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 FZD10Q9ULW2 581 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 AP4E1Q9UPM8 1137 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 SNX24Q9Y343 169 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 NEU2Q9Y3R4 380 aa17.21■□□□□ 0.35
C1orf43-201ENST00000350592 APOC4-APOC2K7ER74 178 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 APOC2P02655 101 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 FAM153BP0C7A2 387 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 IL4RP24394 825 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 L1CAMP32004 1257 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 AIF1P55008 147 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
C1orf43-201ENST00000350592 DYNLT1P63172 113 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 DEFB103AP81534 67 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 MMRN1Q13201 1228 aa17.2■□□□□ 0.34
C1orf43-201ENST00000350592 CA9Q16790 459 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms