RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NPY6RQ99463 290 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SMOQ99835 787 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ACBD6Q9BR61 282 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 PAAF1Q9BRP4 392 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TMEM121Q9BTD3 319 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SEZ6LQ9BYH1 1024 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ROPN1BQ9BZX4 212 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TRPV6Q9H1D0 765 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 CDC42EP4Q9H3Q1 356 aaKnown RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ROPN1Q9HAT0 212 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 PRDM16Q9HAZ2 1276 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 CSNK1G1Q9HCP0 422 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 HMX1Q9NP08 348 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 NGRNQ9NPE2 291 aaKnown RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 GPATCH2LQ9NWQ4 482 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MTMR10Q9NXD2 777 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SAE1Q9UBE0 346 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TPX2Q9ULW0 747 aaKnown RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SHOC2Q9UQ13 582 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 FARP1Q9Y4F1 1045 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 A0A1W2PQ45 241 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 A0A1W2PQY0 241 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 BCLAF3A2AJT9 711 aaKnown RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 SRRM3A6NNA2 597 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 SGK1O00141 431 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ARVCFO00192 962 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 SMAPO00193 183 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 APOL1O14791 398 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ALOX15BO15296 676 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 FKTNO75072 461 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 B3GAT3O94766 335 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 MYCNP04198 464 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 FYNP06241 537 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 FAM200BP0CF97 657 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 RBP3P10745 1247 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ODC1P11926 461 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 COL6A1P12109 1028 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 DESP17661 470 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 NR1D1P20393 614 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 STIP1P31948 543 aaKnown RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 NOS2P35228 1153 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 BRCC3P46736 316 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 VPS41P49754 854 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 IRAK1P51617 712 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 GDF10P55107 478 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 SLC8A3P57103 927 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 DAOAP59103 153 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 EIF3EP60228 445 aaKnown RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 YWHAZP63104 245 aaKnown RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 DYNLT1P63172 113 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ADIGQ0VDE8 80 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 GPS1Q13098 491 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 GPNMBQ14956 572 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 CDO1Q16878 200 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 KRT71Q3SY84 523 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ANKRD20A8PQ5CZ79 823 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 INTS6LQ5JSJ4 861 aaKnown RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ERMARDQ5T6L9 678 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 SLC24A5Q71RS6 500 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 BHLHA9Q7RTU4 235 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 GSTA5Q7RTV2 222 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 PCGF5Q86SE9 256 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 UNC45BQ8IWX7 931 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 DEFB106AQ8N104 65 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 ARFGAP2Q8N6H7 521 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 NAT8LQ8N9F0 302 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 RSPH1Q8WYR4 309 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 PRCCQ92733 491 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 HAUS1Q96CS2 278 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 PWWP2AQ96N64 755 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 SLC9A7Q96T83 725 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 CALN1Q9BXU9 219 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 NRDE2Q9H7Z3 1164 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 USP29Q9HBJ7 922 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 LRRC4Q9HBW1 653 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 CNGB3Q9NQW8 809 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 KRT82Q9NSB4 513 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 TMEM30AQ9NV96 361 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 NINJ2Q9NZG7 142 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 CALCOCO1Q9P1Z2 691 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 RCOR3Q9P2K3 495 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 SLC12A6Q9UHW9 1150 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 DSEQ9UL01 958 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 FZD10Q9ULW2 581 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 NOD1Q9Y239 953 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 TIMM13Q9Y5L4 95 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 USP3Q9Y6I4 520 aa7.21□□□□□ -1.26
TRIM55-203ENST00000350034 COL4A4P53420 1690 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 RANBP2P49792 3224 aaKnown RBP7.21□□□□□ -1.26
TRIM55-203ENST00000350034 PIEZO1Q92508 2521 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ARHGEF37A1IGU5 675 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CFAP69A5D8W1 941 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 E7ESA3 106 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 NRP1O14786 923 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 RASGRF2O14827 1237 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 MCF2LO15068 1137 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 EIF3HO15372 352 aaKnown RBP eCLIP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms