RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 FNIP2Q9P278 1114 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 C5orf60A6NFR6 353 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 E7EVH7 732 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 PPP1R12AO14974 1030 aaPredicted RBP11.2□□□□□ -0.62
EPB41-203ENST00000349460 CCDC130P13994 396 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 TKTP29401 623 aaKnown RBP11.2□□□□□ -0.62
EPB41-203ENST00000349460 DAOAP59103 153 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 EIF3EP60228 445 aaKnown RBP11.2□□□□□ -0.62
EPB41-203ENST00000349460 SMARCB1Q12824 385 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 DAB2IPQ5VWQ8 1189 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 FAM35AQ86V20 835 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 P3H4Q92791 437 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 FUBP3Q96I24 572 aaKnown RBP eCLIP11.2□□□□□ -0.62
EPB41-203ENST00000349460 OLFM3Q96PB7 478 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 HINFPQ9BQA5 517 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 APOL6Q9BWW8 343 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 FAM49BQ9NUQ9 324 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 CLUHO75153 1309 aa11.2□□□□□ -0.62
EPB41-203ENST00000349460 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 ARVCFO00192 962 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 RASGRF2O14827 1237 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 CDH16O75309 829 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 CKBP12277 381 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 TPSB2P20231 275 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 LMAN1P49257 510 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 APLP1P51693 650 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 NRG1Q02297 640 aaPredicted RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 MTA1Q13330 715 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 EIF4EBP2Q13542 120 aaPredicted RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 KRT81Q14533 505 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 TPSAB1Q15661 275 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.626e-7■■■■□ 21.2
EPB41-203ENST00000349460 NRDE2Q9H7Z3 1164 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 USP29Q9HBJ7 922 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 EIF2B3Q9NR50 452 aaKnown RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 MIOSQ9NXC5 875 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 TULP2O00295 520 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 SYN3O14994 580 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 NCAM2O15394 837 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 MGEA5O60502 916 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 OAZ2O95190 189 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 CD52P31358 61 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 MAGEA4P43358 317 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 CLCNKBP51801 687 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 ARL4CP56559 192 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 TRIM32Q13049 653 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 SEMA3BQ13214 749 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 AUHQ13825 339 aaKnown RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 ZNF771Q7L3S4 317 aaPredicted RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 THEM5Q8N1Q8 247 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 EPN3Q9H201 632 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 DGKIO75912 1065 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 KCNJ11Q14654 390 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 OTUD1Q5VV17 481 aaPredicted RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 DSTYKQ6XUX3 929 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 TMEM130Q8N3G9 435 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 PCDH19Q8TAB3 1148 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 PIWIL1Q96J94 861 aaKnown RBP11.19□□□□□ -0.62
EPB41-203ENST00000349460 ZFP42Q96MM3 310 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 RBM15Q96T37 977 aaKnown RBP eCLIP11.19□□□□□ -0.621e-6■□□□□ 9.3
EPB41-203ENST00000349460 RTP3Q9BQQ7 232 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 LRRC4Q9HBW1 653 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 TMEM161AQ9NX61 479 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 CALCOCO1Q9P1Z2 691 aa11.19□□□□□ -0.62
EPB41-203ENST00000349460 RGS16O15492 202 aaPredicted RBP11.18□□□□□ -0.62
EPB41-203ENST00000349460 HOXA2O43364 376 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 IGLV3-25P01717 112 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 RBP3P10745 1247 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 PHBP35232 272 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 RPL22P35268 128 aaKnown RBP11.18□□□□□ -0.62
EPB41-203ENST00000349460 CHKAP35790 457 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 MAGEA11P43364 429 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 GLUD2P49448 558 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 RGS7P49802 495 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 GPS1Q13098 491 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 BFSP2Q13515 415 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 C15orf59Q2T9L4 293 aaPredicted RBP11.18□□□□□ -0.62
EPB41-203ENST00000349460 SLC45A4Q5BKX6 768 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 KIAA0319Q5VV43 1072 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 KAZNQ674X7 775 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 LRRC31Q6UY01 552 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 C4orf50Q6ZRC1 276 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 KLHDC8BQ8IXV7 354 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 URGCPQ8TCY9 931 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.18□□□□□ -0.62
EPB41-203ENST00000349460 CPT1BQ92523 772 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 DHRS4Q9BTZ2 278 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.18□□□□□ -0.628e-9■■■□□ 17.3
EPB41-203ENST00000349460 AP4E1Q9UPM8 1137 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 A0A1W2PQ45 241 aaPredicted RBP11.18□□□□□ -0.62
EPB41-203ENST00000349460 A0A1W2PQY0 241 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 H3BRJ5 948 aa11.18□□□□□ -0.62
EPB41-203ENST00000349460 SGK1O00141 431 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms