RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 VAV1P15498 845 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 DRAP1Q14919 205 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 DCAF6Q58WW2 860 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 FBXO16Q8IX29 292 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 C2orf81A6NN90 581 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 DGAT1O75907 488 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 CCDC166P0CW27 439 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 ZNF177Q13360 481 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 TRIP10Q15642 601 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 FAM171BQ6P995 826 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 IKBIPQ70UQ0 350 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 WDR60Q8WVS4 1066 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 TRABDQ9H4I3 376 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 CHST12Q9NRB3 414 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 FAM49BQ9NUQ9 324 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 PYCARDQ9ULZ3 195 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 RUVBL2Q9Y230 463 aaKnown RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 H7C0S8 307 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 OR7A10O76100 309 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 ACADLP28330 430 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 PTK6Q13882 451 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 UGP2Q16851 508 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 POTEAQ6S8J7 498 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 IGDCC4Q8TDY8 1250 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 SEC16BQ96JE7 1060 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 RCVRNP35243 200 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 GRIK3Q13003 919 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 ZMYND11Q15326 602 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 ZNF284Q2VY69 593 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 NECAB2Q7Z6G3 386 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 SLC9A6Q92581 669 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 CYFIP2Q96F07 1278 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 B2RBV5 119 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 EYA4O95677 639 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 BACE1P56817 501 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 TRAF2Q12933 501 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 KLHL3Q9UH77 587 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 CHMP2BQ9UQN3 213 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 TRIM17Q9Y577 477 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 SMCO3A2RU48 225 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 H3BMM5 538 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 WARSP23381 471 aaKnown RBP12.15□□□□□ -0.46
TRAF3-201ENST00000347662 PPP2R1BP30154 601 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 CDC25BP30305 580 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 GPR141Q7Z602 305 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 RBBP8NLQ8NC74 664 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-201ENST00000347662 VPS33AQ96AX1 596 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 SKA1Q96BD8 255 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 JMJD4Q9H9V9 463 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 TMEM138Q9NPI0 162 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAF3-201ENST00000347662 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 FAM220BPB1ANY3 271 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 KHDRBS3O75525 346 aaKnown RBP12.15□□□□□ -0.46
TRAF3-201ENST00000347662 TCF7P36402 384 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-201ENST00000347662 KYAT1Q16773 422 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 AGMOQ6ZNB7 445 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 TRPV3Q8NET8 790 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 CASP10Q92851 521 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 KCNK16Q96T55 309 aa12.15□□□□□ -0.46
TRAF3-201ENST00000347662 YY1P25490 414 aa12.15□□□□□ -0.47
TRAF3-201ENST00000347662 P3H1Q32P28 736 aa12.15□□□□□ -0.47
TRAF3-201ENST00000347662 GLRA4Q5JXX5 417 aa12.15□□□□□ -0.47
TRAF3-201ENST00000347662 CHST13Q8NET6 341 aa12.15□□□□□ -0.47
TRAF3-201ENST00000347662 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.47
TRAF3-201ENST00000347662 FOXN1O15353 648 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 MAGEB2O15479 319 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 FNTAP49354 379 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 EMBQ6PCB8 327 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 TTC39CQ8N584 583 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 YME1L1Q96TA2 773 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 C6orf62Q9GZU0 229 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 TKFCQ3LXA3 575 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 RNF19BQ6ZMZ0 732 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 SETD3Q86TU7 594 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 TUBGCP4Q9UGJ1 667 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 ZNF112Q9UJU3 913 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 LRCH1Q9Y2L9 728 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 CFAP73A6NFT4 308 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 NCK2O43639 380 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 EXTL3O43909 919 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 VPS26AO75436 327 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 DNAL1Q4LDG9 190 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 REXO5Q96IC2 774 aaKnown RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 CIPCQ9C0C6 399 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 RHBGQ9H310 441 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 KCNH7Q9NS40 1196 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 KLHL28Q9NXS3 571 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 WDR19Q8NEZ3 1342 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 AP1G2O75843 785 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 STARP49675 285 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms