RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PCDH18Q9HCL0 1135 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 KLK14Q9P0G3 267 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 PSMC3IPQ9P2W1 217 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 TTC3P53804 2025 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 KCNN4O15554 427 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PEX11AO75192 247 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PRKCGP05129 697 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 DHRS4L1P0CG22 281 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 VAV1P15498 845 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 HMGB2P26583 209 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 TKTP29401 623 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 NDUFV1P49821 464 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 GOLGA7BQ2TAP0 167 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 MDH1BQ5I0G3 518 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 KIAA0319Q5VV43 1072 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 ZCCHC23Q6ZST2 131 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 TREML1Q86YW5 311 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 FAM172AQ8WUF8 416 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SLC35F5Q8WV83 523 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 KBTBD7Q8WVZ9 684 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF778Q96MU6 729 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 GORASP1Q9BQQ3 440 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 DENND2DQ9H6A0 471 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 RAB6BQ9NRW1 208 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SETD4Q9NVD3 440 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 DPP3Q9NY33 737 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SLC5A4Q9NY91 659 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 NKIRAS1Q9NYS0 192 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 AKT3Q9Y243 479 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 TSC2P49815 1807 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PDCD11Q14690 1871 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 CLGNO14967 610 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 TNNC2P02585 160 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 DLDP09622 509 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 GNAZP19086 355 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 CPA2P48052 419 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 IRX3P78415 501 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 IL9RQ01113 521 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 KHDC1Q4VXA5 237 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PPP6R3Q5H9R7 873 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 DARS2Q6PI48 645 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 MTHFD1LQ6UB35 978 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 CES3Q6UWW8 571 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 RGS9BPQ6ZS82 235 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 ZBTB8OSQ8IWT0 167 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 HACE1Q8IYU2 909 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 FNIP1Q8TF40 1166 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 WDR60Q8WVS4 1066 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 RSAD2Q8WXG1 361 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 CADM1Q9BY67 442 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 STMN4Q9H169 189 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 NXF3Q9H4D5 531 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SYNCQ9H7C4 482 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PSAT1Q9Y617 370 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 CCDC195A0A1B0GUA6 201 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SLC15A5A6NIM6 579 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 H0Y3Z8 333 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 CLDN5O00501 218 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SMPD1P17405 629 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SERPINB3P29508 390 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 L1CAMP32004 1257 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 TUBP50607 506 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 INCA1Q0VD86 236 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PTK7Q13308 1070 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PRKD1Q15139 912 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 C16orf46Q6P387 395 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 NLRP9Q7RTR0 991 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 CLNKQ7Z7G1 428 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 LONP2Q86WA8 852 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 ADGRF2Q8IZF7 708 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 ACVR1CQ8NER5 493 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 N4BP2L2Q92802 583 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 PTCD3Q96EY7 689 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SIGLEC10Q96LC7 697 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 LGMNQ99538 433 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 NGRNQ9NPE2 291 aaKnown RBP6.29□□□□□ -1.4
CLCN3-201ENST00000347613 HESX1Q9UBX0 185 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 SNX9Q9Y5X1 595 aa6.29□□□□□ -1.4
CLCN3-201ENST00000347613 EYSQ5T1H1 3165 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 A0A0G2JND7 137 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 A0A1B0GUA9 196 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 FAM72CH0Y354 149 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 ITM2AO43736 263 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 GPD1P21695 349 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 CACNA2D1P54289 1103 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 IRX4P78413 519 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 RIPK1Q13546 671 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 FAM72AQ5TYM5 149 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 FAM72DQ6L9T8 149 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 LCLAT1Q6UWP7 414 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 UNC5AQ6ZN44 842 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 HFE2Q6ZVN8 426 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 FAM72BQ86X60 149 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 PALM2Q8IXS6 379 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SDR16C5Q8N3Y7 309 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms