RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.57
ECM1-201ENST00000346569 MRPS25P82663 173 aaKnown RBP11.46□□□□□ -0.57
ECM1-201ENST00000346569 SLC7A5Q01650 507 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 EIF4EBP2Q13542 120 aaPredicted RBP11.46□□□□□ -0.57
ECM1-201ENST00000346569 PSMD5Q16401 504 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 DDR2Q16832 855 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 SMTNL2Q2TAL5 461 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 ERMARDQ5T6L9 678 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 RASIP1Q5U651 963 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 BSPRYQ5W0U4 402 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 PSRC1Q6PGN9 363 aaPredicted RBP11.46□□□□□ -0.57
ECM1-201ENST00000346569 CCNI2Q6ZMN8 369 aaPredicted RBP11.46□□□□□ -0.57
ECM1-201ENST00000346569 MAATS1Q7Z4T9 603 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 SCD5Q86SK9 330 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 VSIG1Q86XK7 387 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 SCN4BQ8IWT1 228 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 KLHL7Q8IXQ5 586 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 C7orf61Q8IZ16 206 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 NUP93Q8N1F7 819 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 TTC9BQ8N6N2 239 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.57
ECM1-201ENST00000346569 RUBCNQ92622 972 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 TMEM169Q96HH4 297 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 SPATA17Q96L03 361 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 PGLYRP2Q96PD5 576 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 YME1L1Q96TA2 773 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 HERC2P3Q9BVR0 1158 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.46□□□□□ -0.57
ECM1-201ENST00000346569 PCYOX1Q9UHG3 505 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 MTUS1Q9ULD2 1270 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 SCML2Q9UQR0 700 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 INSL6Q9Y581 213 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 CDY1Q9Y6F8 540 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 COL4A4P53420 1690 aaPredicted RBP11.46□□□□□ -0.58
ECM1-201ENST00000346569 LRRD1A4D1F6 860 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 PHF2O75151 1096 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 CD48P09326 243 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 KRT10P13645 584 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 CPB1P15086 417 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 DESP17661 470 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 L1CAMP32004 1257 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 COILP38432 576 aaPredicted RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 GPR15P49685 360 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 PGFP49763 221 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 ARPP19P56211 112 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 VSNL1P62760 191 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 ROR1Q01973 937 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 DUSP4Q13115 394 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 SMC1AQ14683 1233 aaKnown RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 BRD3Q15059 726 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 PDK2Q15119 407 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 CCNG2Q16589 344 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 CCDC70Q6NSX1 233 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 C8orf74Q6P047 294 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 TTC27Q6P3X3 843 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 CCDC50Q8IVM0 306 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 FIBCD1Q8N539 461 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 KCTD6Q8NC69 237 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 CCDC26Q8TAB7 109 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 SEC14L1Q92503 715 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 MAGOHBQ96A72 148 aaKnown RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 CEP295NLQ96MC4 621 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 SLC9A7Q96T83 725 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 RAD9AQ99638 391 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 SNRNP25Q9BV90 132 aaKnown RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 DCLK3Q9C098 648 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 WDR6Q9NNW5 1121 aaKnown RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 GDF3Q9NR23 364 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 KLHL11Q9NVR0 708 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 COMMD8Q9NX08 183 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 MTMR10Q9NXD2 777 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 STIM2Q9P246 746 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 AMACRQ9UHK6 382 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 STAP1Q9ULZ2 295 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 R3HDM2Q9Y2K5 976 aaKnown RBP11.45□□□□□ -0.58
ECM1-201ENST00000346569 SLC27A5Q9Y2P5 690 aa11.45□□□□□ -0.58
ECM1-201ENST00000346569 GOLGA6L10A0A0M3HER8 536 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 CCDC151A5D8V7 595 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 ZNF487B1APH4 448 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 H0YGN5 161 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 M0QYT0 321 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 CAPN9O14815 690 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 TJP3O95049 919 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 IGLV3-25P01717 112 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 NCAM1P13591 858 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 SYN1P17600 705 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 RPL17P18621 184 aaKnown RBP11.44□□□□□ -0.58
ECM1-201ENST00000346569 PPM1AP35813 382 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 FNTAP49354 379 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 SULT1E1P49888 294 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 CDH6P55285 790 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 RAB33AQ14088 237 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 DHX34Q14147 1143 aaKnown RBP11.44□□□□□ -0.58
ECM1-201ENST00000346569 DPYSL3Q14195 570 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 DPYSL2Q16555 572 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 CA9Q16790 459 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms