RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ZNF132P52740 706 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 DMWDQ09019 674 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 C12orf40Q86WS4 652 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 FAXDC2Q96IV6 333 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 SLITRK1Q96PX8 696 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 PRRX2Q99811 253 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 CRACR2AQ9BSW2 395 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 VPS16Q9H269 839 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 ECT2Q9H8V3 914 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 TAB2Q9NYJ8 693 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 CFAP97Q9P2B7 532 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 TSPAN16Q9UKR8 245 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 USP3Q9Y6I4 520 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 PIEZO1Q92508 2521 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 O00370 1275 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 AFPP02771 609 aaKnown RBP16.94■□□□□ 0.3
RAB5C-201ENST00000346213 MLLT6P55198 1093 aaPredicted RBP16.94■□□□□ 0.3
RAB5C-201ENST00000346213 SATB1Q01826 763 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 PIGZQ86VD9 579 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 EHBP1Q8NDI1 1231 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 OVCA2Q8WZ82 227 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 SIX2Q9NPC8 291 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 PRMT8Q9NR22 394 aaPredicted RBP16.94■□□□□ 0.3
RAB5C-201ENST00000346213 SPATA6Q9NWH7 488 aaPredicted RBP16.94■□□□□ 0.3
RAB5C-201ENST00000346213 DUS2Q9NX74 493 aaKnown RBP16.94■□□□□ 0.3
RAB5C-201ENST00000346213 ZMYM5Q9UJ78 669 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 SCML2Q9UQR0 700 aa16.94■□□□□ 0.3
RAB5C-201ENST00000346213 EGFP01133 1207 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 CYP17A1P05093 508 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 MBL2P11226 248 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-201ENST00000346213 SLC9A1P19634 815 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 BRD2P25440 801 aaKnown RBP16.93■□□□□ 0.3
RAB5C-201ENST00000346213 PDE4CQ08493 712 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 RAB41Q5JT25 222 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 MIIPQ5JXC2 388 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 TMEM270Q6UE05 265 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 RALGPS2Q86X27 583 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-201ENST00000346213 PPM1KQ8N3J5 372 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 TC2NQ8N9U0 490 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 UBA3Q8TBC4 463 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 PKNOX2Q96KN3 472 aa16.93■□□□□ 0.3
RAB5C-201ENST00000346213 C8orf33Q9H7E9 229 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-201ENST00000346213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
RAB5C-201ENST00000346213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.93■□□□□ 0.31e-7■□□□□ 8.6
RAB5C-201ENST00000346213 A0A1W2PQC6 194 aa16.92■□□□□ 0.3
RAB5C-201ENST00000346213 LGALS16A8MUM7 142 aa16.92■□□□□ 0.3
RAB5C-201ENST00000346213 MAN2B1O00754 1011 aa16.92■□□□□ 0.3
RAB5C-201ENST00000346213 OPRD1P41143 372 aa16.92■□□□□ 0.3
RAB5C-201ENST00000346213 TMEM196Q5HYL7 178 aa16.92■□□□□ 0.3
RAB5C-201ENST00000346213 NT5C1BQ96P26 610 aa16.92■□□□□ 0.3
RAB5C-201ENST00000346213 THG1LQ9NWX6 298 aaKnown RBP16.92■□□□□ 0.3
RAB5C-201ENST00000346213 TLR5O60602 858 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PNMA6AP0CW24 399 aaPredicted RBP16.91■□□□□ 0.3
RAB5C-201ENST00000346213 IRF1P10914 325 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 GALK1P51570 392 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 HECTD3Q5T447 861 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 CREBRFQ8IUR6 639 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 BBS7Q8IWZ6 715 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 ANKRD52Q8NB46 1076 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 RBBP8NLQ8NC74 664 aaPredicted RBP16.91■□□□□ 0.3
RAB5C-201ENST00000346213 NELL1Q92832 810 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 TUBGCP2Q9BSJ2 902 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 KLF16Q9BXK1 252 aaPredicted RBP16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PNPLA8Q9NP80 782 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 CYLDQ9NQC7 956 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.91■□□□□ 0.3
RAB5C-201ENST00000346213 AKR1B15C9JRZ8 316 aaPredicted RBP16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PROB1E7EW31 1015 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PIK3R2O00459 728 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 P4HA2O15460 535 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 TPM2P07951 284 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 CD19P15391 556 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 SLC6A11P48066 632 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PPP3CCP48454 512 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 TUBP50607 506 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 CSTF1Q05048 431 aaKnown RBP16.91■□□□□ 0.3
RAB5C-201ENST00000346213 TRIM14Q14142 442 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PDGFRLQ15198 375 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 RHBDF2Q6PJF5 856 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 TMEM139Q8IV31 216 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 ADGRG2Q8IZP9 1017 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PDZD8Q8NEN9 1154 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PANX2Q96RD6 677 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 COMMD8Q9NX08 183 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 PCDHB4Q9Y5E5 795 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 GPR179Q6PRD1 2367 aa16.91■□□□□ 0.3
RAB5C-201ENST00000346213 DMXL1Q9Y485 3027 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 K7ESF4 209 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 TRDMT1O14717 391 aaKnown RBP16.9■□□□□ 0.3
RAB5C-201ENST00000346213 TRIM24O15164 1050 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 GNA14O95837 355 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 PFKLP17858 780 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 MTIF2P46199 727 aaKnown RBP16.9■□□□□ 0.3
RAB5C-201ENST00000346213 IFNAR2P48551 515 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 UBXN1Q04323 297 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 CLEC4CQ8WTT0 213 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 NELL2Q99435 816 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 ULBP1Q9BZM6 244 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 CYTH4Q9UIA0 394 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms