RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 MPOP05164 745 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 NR3C2P08235 984 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 CCDC130P13994 396 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 ITGADQ13349 1161 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 DGUOKQ16854 277 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 CYP4F12Q9HCS2 524 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 DNPEPQ9ULA0 475 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 CPS1P31327 1500 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 ZBTB24O43167 697 aaPredicted RBP17.98■□□□□ 0.47
SPAST-202ENST00000345662 RHOBTB1O94844 696 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 MED26O95402 600 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 GARTP22102 1010 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 CIAPIN1Q6FI81 312 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 PRMT9Q6P2P2 845 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 PLEKHA8Q96JA3 519 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 KCTD14Q9BQ13 255 aaPredicted RBP17.98■□□□□ 0.47
SPAST-202ENST00000345662 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 TUBGCP4Q9UGJ1 667 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 HNRNPH3P31942 346 aaKnown RBP17.98■□□□□ 0.47
SPAST-202ENST00000345662 KRT33BQ14525 404 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 ATF7IP2Q5U623 682 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 KYAT3Q6YP21 454 aaKnown RBP17.98■□□□□ 0.47
SPAST-202ENST00000345662 RBM44Q6ZP01 1051 aaKnown RBP17.98■□□□□ 0.47
SPAST-202ENST00000345662 ABRAQ8N0Z2 381 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 VPS37AQ8NEZ2 397 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 EIF3LQ9Y262 564 aaKnown RBP17.98■□□□□ 0.47
SPAST-202ENST00000345662 DYTNA2CJ06 578 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 CYTH3O43739 400 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 RBP1P09455 135 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 RGS4P49798 205 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 BAATQ14032 418 aaPredicted RBP17.98■□□□□ 0.47
SPAST-202ENST00000345662 ZNF618Q5T7W0 954 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 RINLQ6ZS11 566 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 ZCCHC23Q6ZST2 131 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 BNIPLQ7Z465 357 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 ART4Q93070 314 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 SLC30A1Q9Y6M5 507 aa17.98■□□□□ 0.47
SPAST-202ENST00000345662 LDLRP01130 860 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 RARBP10826 455 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 PBX1P40424 430 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 IL5RAQ01344 420 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 TMEM119Q4V9L6 283 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 POP1Q99575 1024 aaKnown RBP17.97■□□□□ 0.47
SPAST-202ENST00000345662 CATSPERBQ9H7T0 1116 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 AVENQ9NQS1 362 aaPredicted RBP17.97■□□□□ 0.47
SPAST-202ENST00000345662 FAM237BA0A1B0GVD1 139 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 ABHD2P08910 425 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 PRKAA2P54646 552 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 COG2Q14746 738 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 ATP6AP1LQ52LC2 224 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 GLRA4Q5JXX5 417 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 RDM1Q8NG50 284 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 SPATA17Q96L03 361 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 USE1Q9NZ43 259 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 GPRC5DQ9NZD1 345 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 TJP2Q9UDY2 1190 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 CBFA2T3O75081 653 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 GP5P40197 560 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 TP53BP2Q13625 1128 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 BLMHQ13867 455 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 OTUD3Q5T2D3 398 aaPredicted RBP17.97■□□□□ 0.47
SPAST-202ENST00000345662 TLK2Q86UE8 772 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 RSPH1Q8WYR4 309 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 VCPIP1Q96JH7 1222 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 ZBED2Q9BTP6 218 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 C2CD2LO14523 706 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 MAFGO15525 162 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 ETS2P15036 469 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 SREBF1P36956 1147 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 GCLCP48506 637 aaPredicted RBP17.97■□□□□ 0.47
SPAST-202ENST00000345662 PPP4CP60510 307 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 SLC25A3Q00325 362 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 SV2AQ7L0J3 742 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 FNIP1Q8TF40 1166 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 RORBQ92753 470 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 VPS33AQ96AX1 596 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 PHF21AQ96BD5 680 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 HPDLQ96IR7 371 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 BLOC1S4Q9NUP1 217 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.97■□□□□ 0.47
SPAST-202ENST00000345662 AK5Q9Y6K8 562 aa17.97■□□□□ 0.47
SPAST-202ENST00000345662 MAGEB2O15479 319 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 CNOT3O75175 753 aaKnown RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 MAPRE1Q15691 268 aaKnown RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 ZCWPW1Q9H0M4 648 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 STK39Q9UEW8 545 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 EPHB6O15197 1021 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 CDK7P50613 346 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 BLVRAP53004 296 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 PLIN5Q00G26 463 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 SLC5A9Q2M3M2 681 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 SGO1Q5FBB7 561 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 SAMD4BQ5PRF9 694 aaKnown RBP17.96■□□□□ 0.47
SPAST-202ENST00000345662 CACHD1Q5VU97 1274 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 MFSD7Q6UXD7 560 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 ARHGEF19Q8IW93 802 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 SVOPQ8N4V2 548 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 CCDC28BQ9BUN5 200 aa17.96■□□□□ 0.47
SPAST-202ENST00000345662 SEMA6AQ9H2E6 1030 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms