RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 KRT7P08729 469 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 NCAM1P13591 858 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 YWHAQP27348 245 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 CA8P35219 290 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 GJC1P36383 396 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 SULT1E1P49888 294 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 YWHAGP61981 247 aaKnown RBP eCLIP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 AADACL2Q6P093 401 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 TCEAL8Q8IYN2 117 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 LRRN4CLQ8ND94 238 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 MNS1Q8NEH6 495 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 GIPC2Q8TF65 315 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 KLHL5Q96PQ7 755 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 TGS1Q96RS0 853 aaKnown RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 ENTPD7Q9NQZ7 604 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 ABCC13Q9NSE7 274 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 DDX56Q9NY93 547 aaKnown RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 RRN3Q9NYV6 651 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 CHD7Q9P2D1 2997 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 PCSK1NQ9UHG2 260 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 MTUS1Q9ULD2 1270 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 SLC38A8A6NNN8 435 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 H0YGN5 161 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 PGFP49763 221 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 ERVK-21P61565 698 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 PITX1P78337 314 aaPredicted RBP17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 MTMR3Q13615 1198 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 CYP4V2Q6ZWL3 525 aaPredicted RBP17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 MON1AQ86VX9 555 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 MRPL43Q8N983 215 aaKnown RBP17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 EXD1Q8NHP7 514 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 EDEM1Q92611 657 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 PEBP4Q96S96 227 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 ZWILCHQ9H900 591 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 NMUR1Q9HB89 426 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 TLR9Q9NR96 1032 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 YIPF1Q9Y548 306 aa17.06■□□□□ 0.32
CEACAM1-202ENST00000344391 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 A0A1W2PQH9 124 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 CTAGE15A4D2H0 777 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 PGRMC1O00264 195 aaKnown RBP17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 GRM6O15303 877 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 PRPSAP2O60256 369 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 ZRANB2O95218 330 aaKnown RBP eCLIP17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 CTAGE8P0CG41 777 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 ELF1P32519 619 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 PBX2P40425 430 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 ATXN1P54253 815 aaKnown RBP17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 CAMK1Q14012 370 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 SEL1L2Q5TEA6 688 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 BTBD8Q5XKL5 378 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 LILRA6Q6PI73 481 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 CTAGE6Q86UF2 777 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 CTAGE4Q8IX94 777 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 ARHGAP18Q8N392 663 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 MYRIPQ8NFW9 859 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 FBXO32Q969P5 355 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 TTLL2Q9BWV7 592 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 EMILIN2Q9BXX0 1053 aa17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 MTCL1Q9Y4B5 1905 aaKnown RBP17.05■□□□□ 0.32
CEACAM1-202ENST00000344391 HIDE1A8MVS5 230 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 M0QYT0 321 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 FSCN2O14926 492 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 TGM5O43548 720 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 FGGP02679 453 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 ADH1AP07327 375 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 RARAP10276 462 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 ALDH1A3P47895 512 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 ITIH3Q06033 890 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 SMTNL2Q2TAL5 461 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 BOLA3Q53S33 107 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 KCNT1Q5JUK3 1230 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 PLPP4Q5VZY2 271 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 SCYL2Q6P3W7 929 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 RCOR2Q8IZ40 523 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 CMASQ8NFW8 434 aaPredicted RBP17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 SLC7A14Q8TBB6 771 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 RPGRIP1Q96KN7 1286 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 PBX4Q9BYU1 374 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 GMIPQ9P107 970 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 MYO7AQ13402 2215 aa17.04■□□□□ 0.32
CEACAM1-202ENST00000344391 PRRG1O14668 218 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 KRT1P04264 644 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 RDXP35241 583 aaKnown RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 TAF10Q12962 218 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 CLUL1Q15846 466 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 SPATA4Q8NEY3 305 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 DQX1Q8TE96 717 aaKnown RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 TEKT4Q8WW24 435 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 RAPGEF5Q92565 580 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 ACSF2Q96CM8 615 aaPredicted RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 RBM41Q96IZ5 413 aaKnown RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 SLITRK1Q96PX8 696 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms