RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 IL1BP01584 269 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 SRGAP2CP0DJJ0 459 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 SRGAP2BP0DMP2 458 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 CNGA3Q16281 694 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 TDRD10Q5VZ19 366 aaKnown RBP15.81■□□□□ 0.12
SNX18-202ENST00000343017 DNAJC24Q6P3W2 148 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 TFB1MQ8WVM0 346 aaKnown RBP15.81■□□□□ 0.12
SNX18-202ENST00000343017 TMIGD2Q96BF3 282 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 IFT122Q9HBG6 1241 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 BTBD7Q9P203 1132 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 TJP2Q9UDY2 1190 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 TEX264Q9Y6I9 313 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 COL24A1Q17RW2 1714 aa15.81■□□□□ 0.12
SNX18-202ENST00000343017 ZNF536O15090 1300 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 C3orf70A6NLC5 250 aaPredicted RBP15.8■□□□□ 0.12
SNX18-202ENST00000343017 SNRPAP09012 282 aaKnown RBP15.8■□□□□ 0.12
SNX18-202ENST00000343017 NPR1P16066 1061 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 ITGAXP20702 1163 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 PPIDQ08752 370 aaKnown RBP15.8■□□□□ 0.12
SNX18-202ENST00000343017 ZNF677Q86XU0 584 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 GRIN3AQ8TCU5 1115 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 MAN1C1Q9NR34 630 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 PPP1R1BQ9UD71 204 aaPredicted RBP15.8■□□□□ 0.12
SNX18-202ENST00000343017 AP4B1Q9Y6B7 739 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 E2F8A0AVK6 867 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 PEX1O43933 1283 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 VNN1O95497 513 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 DCTN2Q13561 401 aaKnown RBP15.8■□□□□ 0.12
SNX18-202ENST00000343017 ABCB5Q2M3G0 1257 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 MAVSQ7Z434 540 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 TMC2Q8TDI7 906 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 ZNF606Q8WXB4 792 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 TELO2Q9Y4R8 837 aa15.8■□□□□ 0.12
SNX18-202ENST00000343017 SF3B1O75533 1304 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNX18-202ENST00000343017 SNNO75324 88 aaPredicted RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 TRMUO75648 421 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 C1QAP02745 245 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 BPGMP07738 259 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 VIL1P09327 827 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 CSH1P0DML2 217 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 CSH2P0DML3 217 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 RBP3P10745 1247 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 STT3AP46977 705 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 EIF3EP60228 445 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 SEZ6Q53EL9 994 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 TRMT10BQ6PF06 316 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 KIAA0319LQ8IZA0 1049 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 ARFGAP1Q8N6T3 406 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 RNF148Q8N7C7 305 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 C17orf75Q9HAS0 396 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 KMT5AQ9NQR1 393 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 CIDEBQ9UHD4 219 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 APOBEC2Q9Y235 224 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 TTLL3Q9Y4R7 772 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 FOXD2O60548 495 aaPredicted RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 MAPTP10636 758 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 MMP8P22894 467 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 QARSP47897 775 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 SH3BGRP55822 239 aaPredicted RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 CDKL1Q00532 357 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 ZNF554Q86TJ5 538 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 RFX6Q8HWS3 928 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 PLAC1Q9HBJ0 212 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 SLC17A6Q9P2U8 582 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 NUB1Q9Y5A7 615 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 HMX2A2RU54 273 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 AP1G1O43747 822 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNX18-202ENST00000343017 KRT37O76014 449 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 VARSP26640 1264 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 RFC1P35251 1148 aaPredicted RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 CUL2Q13617 745 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 CYTH1Q15438 398 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 FASTKD1Q53R41 847 aaKnown RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 OGFRL1Q5TC84 451 aaPredicted RBP15.79■□□□□ 0.12
SNX18-202ENST00000343017 ANO5Q75V66 913 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 ENOSF1Q7L5Y1 443 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 KBTBD6Q86V97 674 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 ADGRF2Q8IZF7 708 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 MARVELD2Q8N4S9 558 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 EMC1Q8N766 993 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 SIKE1Q9BRV8 207 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 AFG3L2Q9Y4W6 797 aa15.79■□□□□ 0.12
SNX18-202ENST00000343017 NDC80O14777 642 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 DHX15O43143 795 aaKnown RBP15.78■□□□□ 0.12
SNX18-202ENST00000343017 DCXO43602 365 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 ALDH1B1P30837 517 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 MRPS22P82650 360 aaKnown RBP15.78■□□□□ 0.12
SNX18-202ENST00000343017 MMRN1Q13201 1228 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 DEFB132Q7Z7B7 95 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 MAP4K3Q8IVH8 894 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 GPD1LQ8N335 351 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 ACER1Q8TDN7 264 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 ACTRT2Q8TDY3 377 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 MXRA8Q9BRK3 442 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 COPS7BQ9H9Q2 264 aaPredicted RBP15.78■□□□□ 0.12
SNX18-202ENST00000343017 TFPTP0C1Z6 253 aa15.78■□□□□ 0.12
SNX18-202ENST00000343017 SERPINB8P50452 374 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms